Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Glutamate/aspartate import permease protein GltJ from Pseudomonas sp. DMC3

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 10/219 (4%)

Query: 186 FESGSIWVL-VALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLV----- 239
           F SG  W + +A++A IIA  + S+    R       + +    + L    P+LV     
Sbjct: 25  FISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQLFIW 84

Query: 240 YFLLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQ 299
           YFL+   +    P L+ +  Q          +++V L ++TA+ + E VR+GI A+  GQ
Sbjct: 85  YFLVPDLLP---PDLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQ 141

Query: 300 TEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGT 359
             AA ++G    +    V++PQA RIIIPPLTS++LN+ KNSS+A  IG  +L++     
Sbjct: 142 ESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQ-TKQ 200

Query: 360 TLNQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVAL 398
           T   +    E  ++  L+Y TL++    LM L  +KVA+
Sbjct: 201 TAEFSANLFEAFTLATLIYFTLNMSLMLLMRLVEKKVAV 239



 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)

Query: 92  FLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFW 151
           F+ GL  T  ++++  ++A +LG L+GI R   N ++S +A  Y+E FRN+PLL+Q+F W
Sbjct: 25  FISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQLFIW 84

Query: 152 YFVVLQALPSARESMHLGEWF 172
           YF+V   LP       L EW+
Sbjct: 85  YFLVPDLLPP-----DLQEWY 100