Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., glutamate/aspartate ABC transporter permease GltK from Escherichia coli ECRC62

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 49/151 (32%), Positives = 90/151 (59%), Gaps = 6/151 (3%)

Query: 251 YPVLRGFNFQGGISVLPE----LAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSL 306
           Y ++ GF  Q  + + P+    L + +VA +++ A++ +EI+R+GI ++S GQ+ AA++L
Sbjct: 76  YLIVPGF-LQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALAL 134

Query: 307 GLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366
           G+T  +++KL+I+PQA R ++P L +Q + L +++SL   +   D     A T   + G 
Sbjct: 135 GMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRT-ASTIGERDGT 193

Query: 367 AIEIISMTMLVYLTLSLLTSALMNLYNRKVA 397
            +E+I     VY  +SL  S L++   R+ A
Sbjct: 194 QVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 18/63 (28%), Positives = 39/63 (61%)

Query: 93  LVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWY 152
           L GL+ T  ++V  +++  + G ++ + RLSS   ++  A  Y+  FR++PL++ + ++Y
Sbjct: 17  LDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFY 76

Query: 153 FVV 155
            +V
Sbjct: 77  LIV 79