Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Putative amino-acid ABC transporter permease protein YhdX from Escherichia coli ECRC62

 Score =  395 bits (1016), Expect = e-115
 Identities = 205/378 (54%), Positives = 273/378 (72%)

Query: 24  NPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIPYD 83
           NPT R+ +FQ+LAV  +   +  + +N +TNL +RGI +GFAFL++ AGFGI Q LI Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 84  ETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLP 143
           +  +YGR F+VGLLNT LVS L I+ A++LGF IG+ARLS NWL+ +L+ +YIE FRN+P
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 144 LLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGIIA 203
            LLQIFFWYF VL+ LP  R+++   +  +L+ +GLY+  P    G I  ++A++  I+ 
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 204 CWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNFQGGI 263
              L  +    Q  TGQ         +L +  P+L  +L G  +  + P LRGFNF+GG+
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 264 SVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQAL 323
            ++PELAAL +AL++YT++FIAEI+R+GI AV +GQ EAA SLGL    TL+ VIIPQAL
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 324 RIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSL 383
           R+IIPPLTSQYLN+ KNSSLA AIGYPD+VS+FAGT LNQTGQAIE I+MTM VYL +SL
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 384 LTSALMNLYNRKVALVER 401
             S LMN+YNR++A+VER
Sbjct: 376 TISLLMNIYNRRIAIVER 393