Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., glutamate/aspartate ABC transporter permease GltJ from Escherichia coli ECRC101

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 3/216 (1%)

Query: 185 IFESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLG 244
           I+    + + +++ A IIA  V S +   R       + +G   + L    P++V F   
Sbjct: 25  IWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTW 84

Query: 245 QPITAEY-PVLRGFNFQGGISV-LPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEA 302
             +  E  P   G  F+  +   +    + ++ L ++TA+ + E VR+ I ++  GQ  A
Sbjct: 85  YLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNA 144

Query: 303 AMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLN 362
           A+++GLT  +  + V++P A R+I+PP+TS+ +NL KNS++A  IG  D+ +  A   L+
Sbjct: 145 ALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQ-ASKLLD 203

Query: 363 QTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVAL 398
            +  A E  +   L Y+ ++     +M L  RKV L
Sbjct: 204 YSAHAWESFTAITLAYVFINAFIMLVMTLVERKVRL 239



 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 73  FGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLA 132
           +GI     P+  T   G  +  G   T  +S+   ++A ++G   GI R   N  +S L 
Sbjct: 7   WGIFLQQAPFGNTTYLGWIWS-GFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLG 65

Query: 133 AVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWF 172
            +Y+E FRN+PL++Q F WY V+ + LP       +G WF
Sbjct: 66  TLYVELFRNVPLIVQFFTWYLVIPELLPE-----KIGMWF 100