Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (298), Expect = 8e-32
 Identities = 69/208 (33%), Positives = 124/208 (59%), Gaps = 6/208 (2%)

Query: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216
           G+L T+ ++++  I    +G A+AL R S +  +R     +I++ +G PL+ VLF+    
Sbjct: 17  GVLWTVCLSVIAFIGGGLVGGAVALCRISPVRAVRWAAIAWIQLIQGTPLLVVLFVCYFG 76

Query: 217 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 276
           L +    G E+  L+ A I +V++ +AY+ E+ RG ++++P+ Q+EAA+ L LS  ++M 
Sbjct: 77  LSIM---GLELPGLVAASIAMVIYVSAYLGEIWRGCIESVPRTQWEAAECLALSRSQRMR 133

Query: 277 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 336
           L++LPQAL+I  P  V   + + K+TSL  I+G  +++  GQ  N   N +      Y+ 
Sbjct: 134 LVVLPQALRIATPPTVGFMVQIVKNTSLASIVGFVELVRAGQLIN---NSIFQPFLIYLI 190

Query: 337 VALVFWIFCFGMSRYSIWLEGKLHTGHK 364
           +A +++  CF +S +S  LE +LH G++
Sbjct: 191 IAALYFAMCFPLSVWSRRLEQRLHFGNR 218