Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  115 bits (289), Expect = 8e-31
 Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 161 TLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLF 220
           TL +++ G+   L +G  LAL R S +  +R L   YI ++RG PLI  LFM    LP F
Sbjct: 22  TLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQF 81

Query: 221 LSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIIL 280
              G E+D +  A+IG+ + +AAY AE +R  + +I KGQ+EAA ++G++ W+ M   IL
Sbjct: 82  ---GIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAIL 138

Query: 281 PQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALV 340
           PQA ++ +P + N+FI L KDTSL   I + ++    Q   +    L   T  Y+  +L+
Sbjct: 139 PQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS--RTLEVFT-MYLAASLI 195

Query: 341 FWIFCFGMSRYSIWLEGKLH 360
           +WI    +S      E +L+
Sbjct: 196 YWIMATVLSTLQNHFENQLN 215