Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  121 bits (303), Expect = 2e-32
 Identities = 70/205 (34%), Positives = 114/205 (55%), Gaps = 8/205 (3%)

Query: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216
           GL++TL I ++ II  +  G  LA+ R S         T Y+ ++R +PL+ VL    ++
Sbjct: 19  GLVITLKITVIAIIIGIVWGTLLAVMRLSSFKPFAWFATAYVNMFRSIPLVMVLLWFYLI 78

Query: 217 LPLFLSQGSEID-----KLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSY 271
           +P FL     +      +L+ A++   MF AAY +E+IR G+Q+I +GQ  AA ALG+++
Sbjct: 79  VPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTH 138

Query: 272 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFAT 331
           W+ M LIILPQA +  +P ++   I LF+DTSLV ++ + D     ++A+T     G   
Sbjct: 139 WQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFF---RTASTIGERDGTQV 195

Query: 332 ESYVFVALVFWIFCFGMSRYSIWLE 356
           E  +F   V+++     S    WL+
Sbjct: 196 EMVLFAGAVYFVISLSASLLVSWLK 220