Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Escherichia coli ECRC62

 Score =  417 bits (1071), Expect = e-121
 Identities = 203/356 (57%), Positives = 258/356 (72%)

Query: 7   QPSLPPPSNTTGVVGWLRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNANWSGTTR 66
           QPS P   N++  + W+RKNLF+   NS+ T+   +L  + +  +L+WA   ANW G+TR
Sbjct: 8   QPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTR 67

Query: 67  NDCTLEGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAYEKTPKRGWIWL 126
            DCT  GACWVFI  R+ QFMYG YP  + WR  L      + +A + ++  P RG    
Sbjct: 68  ADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIA 127

Query: 127 VFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALGRRSD 186
           V+  IYP     L+YGG FGLE VET +WGGL +TLIIA VGI  +LP G+ LALGRRS 
Sbjct: 128 VWAVIYPLIVWWLMYGGFFGLERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSH 187

Query: 187 MPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMA 246
           MPI+R L  ++IE WRGVPLITVLFM+SVMLPLF+++G+ IDKL+RAL+GV++F +AY+A
Sbjct: 188 MPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTNIDKLIRALVGVILFQSAYVA 247

Query: 247 EVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVL 306
           EV+RGGLQA+PKGQYEAA++L L YWK  GL+ILPQALK+ IP +VNT I LFKDTSLV+
Sbjct: 248 EVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVI 307

Query: 307 IIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYSIWLEGKLHTG 362
           IIG+FD+    Q A  DP WLG +TE YVF AL++WIFCF MSRYS  LE + +TG
Sbjct: 308 IIGLFDLFSSVQQATVDPTWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTG 363