Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  115 bits (288), Expect = 1e-30
 Identities = 71/201 (35%), Positives = 118/201 (58%), Gaps = 7/201 (3%)

Query: 162 LIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFL 221
           ++ A+   I SL  G   A+ R S    +R++   YI V + +P++ +LFM+   L LF 
Sbjct: 21  VLTAIAFSIGSLTGGF-FAIMRLSQYGSVRNVAAGYITVIQSIPVLMILFMSYYGLTLF- 78

Query: 222 SQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILP 281
             G EI  LL A + + ++ +AY+AE+ RG +QA+PK Q+EA+ +L L+ +++   +ILP
Sbjct: 79  --GFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTRFQQYRYVILP 136

Query: 282 QALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVF 341
           QAL++++P  V   + L K+TS+V ++G  ++   GQ  N   N      + +  VAL++
Sbjct: 137 QALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVN---NATFRPFQVFFVVALLY 193

Query: 342 WIFCFGMSRYSIWLEGKLHTG 362
           +  CF +SR S  LE  LH G
Sbjct: 194 FAICFPLSRLSRHLERVLHVG 214