Pairwise Alignments

Query, 251 a.a., amino acid ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., arginine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  258 bits (659), Expect = 8e-74
 Identities = 135/255 (52%), Positives = 177/255 (69%), Gaps = 11/255 (4%)

Query: 6   NQDFMIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKG 65
           +++ +I+  D++K +G   +LK I+L V++GE +V+ G SGSGK+T IRCIN LE+ Q G
Sbjct: 5   SEELIIEALDIHKSFGALQILKGISLQVRRGEVVVLIGASGSGKTTFIRCINLLEDIQGG 64

Query: 66  QIIVAGNEL-----------TEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPIWV 114
           +I V G  +            +  +NI   RR++GM FQ FNLFPH+T LEN   API V
Sbjct: 65  RIRVNGRAMGYRERSDGSLVRDSERNIARQRRDIGMVFQRFNLFPHMTALENIIEAPIQV 124

Query: 115 KKMPKDKAEEIAMKYLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTS 174
              P+ +A E A   L RV + ++A  YP  LSGGQQQRVAIAR+L M PQ MLFDEPTS
Sbjct: 125 LGTPRAQALEQARGLLARVGLADKASHYPAMLSGGQQQRVAIARALAMKPQAMLFDEPTS 184

Query: 175 ALDPEMVREVLDVMVELAEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFE 234
           ALDPE V EVL VM ELAEEGMTM+ VTHEMGFA+EVADRV+ +D GE+IE+  P++ F 
Sbjct: 185 ALDPETVGEVLQVMKELAEEGMTMVVVTHEMGFAREVADRVVVLDQGELIEQGPPEQIFS 244

Query: 235 NPQSDRTQNFLAQIL 249
           +P   RT+ FL+++L
Sbjct: 245 HPSHPRTRAFLSRVL 259