Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., class I SAM-dependent rRNA methyltransferase from Rhodanobacter sp000427505 FW510-R12

 Score =  221 bits (563), Expect = 3e-62
 Identities = 126/380 (33%), Positives = 210/380 (55%), Gaps = 12/380 (3%)

Query: 19  HPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQITARVWSFEQEP-IDRDF 77
           HPWV+S  + K E     G  V+V+  +G+++ +A ++ H++I  R+     +  ID D+
Sbjct: 20  HPWVWSAQLHKPEAELPPGSVVEVHDAKGRFVGRALWNGHARIALRLLDTHADAVIDADW 79

Query: 78  FIKRIEQAQLLRNDIIERDGLT-GYRLIAAESDGLPGITIDKYQDYLVCQLLSAGAEYQK 136
              RI +A  LR D ++ D ++  +R++ +E DGL G+ +D+Y D LV +  +AG    +
Sbjct: 80  IAARIARAVQLRRDWLQLDAVSDAWRVVHSEGDGLSGLIVDRYADVLVIEYFAAGMWRFR 139

Query: 137 QTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPPKSVVIEENGVKISVDIV 196
           + +  ALL  FP   +Y  ++  V+K+E  D R   +     P    + E+G++      
Sbjct: 140 EAIHTALLTHFPGAQLYWFAESHVQKQESFDCRSPEV-----PAPFEVHEHGLRFHAAPG 194

Query: 197 GGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALKGGAKRVINADVSQPALD 256
            GHKTGF+ DQRD+R +  +  K++ VL+     GGF ++A+  GA+  +  D+    L+
Sbjct: 195 LGHKTGFFADQRDNRKRFAELAKDRRVLDLCCNAGGFAVHAMAAGAREAVGVDLDASILE 254

Query: 257 TAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVVMDPPKFAESKAQLDGAC 316
            A+ NA  N        A F  AD+F  +R    +G R+D VV+DP K    ++++  A 
Sbjct: 255 VARANAAANNV-----AATFEQADIFDWVRAAVTRGERYDAVVLDPAKLTRDRSKVMDAL 309

Query: 317 RGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAALDAGRDVKFVERFEQAAD 376
           + Y  +N + + I+ PGG LLT SC+GL+ +  F +++   AL+AGR+++ +E     AD
Sbjct: 310 KKYFAMNRMVLDIIPPGGLLLTCSCTGLVGEAEFLEMLRRVALNAGREIQVLEVRGPGAD 369

Query: 377 HPTDTAYPEGFYLKGFACKV 396
           HP  T  PEG YLK   C+V
Sbjct: 370 HPFRTDVPEGRYLKAAFCRV 389