Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., class I SAM-dependent rRNA methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  215 bits (547), Expect = 2e-60
 Identities = 141/391 (36%), Positives = 196/391 (50%), Gaps = 12/391 (3%)

Query: 3   PAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKL--GETVDVYSFEGKWLAKAAYSPHSQ 60
           P I L KGR K LR  HPWVFS  I        L  G  V +     + L  A ++PHS 
Sbjct: 13  PVIRLAKGRSKRLRAGHPWVFSNEIEMGAEAKALPPGSLVTLMDAGDERLGVATFNPHSL 72

Query: 61  ITARVWSFEQ-EPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKY 119
           I ARV S    + +D DF  +R+  A  LR+ +        YRL+ +E+D LPG+ +D+Y
Sbjct: 73  IAARVLSRRAADTVDVDFLAERLRAALALRDTLFPTPH---YRLVHSEADRLPGLIVDRY 129

Query: 120 QDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPP 179
            D L  Q  +AG E     L++AL        +   +D  VRK EGL+    V  G++  
Sbjct: 130 GDVLAVQTNTAGMERLLPVLLDALQMVLAPRAVVLVNDSPVRKLEGLEPHHDVAFGQVDG 189

Query: 180 KSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALK 239
             V +EENG +   D+ GG KTG++ DQRD+R    +  K + VL+ ++Y GGF + A K
Sbjct: 190 P-VELEENGCRFVADLTGGQKTGWFFDQRDNRAFVARLAKGRRVLDLYTYAGGFAVQAAK 248

Query: 240 GGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVV 299
            GA + I  D S+ +L  A   A LNG ++   R     A+ F  +      G RF +VV
Sbjct: 249 AGATQTIAVDRSEHSLALADQAARLNGVEVQTVR-----AEAFAEMERLALAGERFGLVV 303

Query: 300 MDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAAL 359
            DPP F +S+  L    +GY+ +  LA  ++ PGG LL  SCS  M    F + I     
Sbjct: 304 ADPPAFVKSRKDLGAGAKGYRKMARLAAALVEPGGFLLCASCSHHMPVETFAEEIGHGLH 363

Query: 360 DAGRDVKFVERFEQAADHPTDTAYPEGFYLK 390
            AGR  + +     A+DHP     PE  YLK
Sbjct: 364 LAGRSGRILRSAGAASDHPVHPWLPESAYLK 394