Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., predicted methyltransferase (RefSeq) from Escherichia coli BW25113

 Score =  509 bits (1311), Expect = e-149
 Identities = 250/398 (62%), Positives = 311/398 (78%), Gaps = 3/398 (0%)

Query: 1   MTPAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQ 60
           M+  + L KGR+KSL R+HPWVFS  ++++EG   LGET+D+   +GKWLA+ AYSP SQ
Sbjct: 1   MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ 60

Query: 61  ITARVWSFE-QEPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKY 119
           I ARVW+F+  E ID  FF +R++QAQ  R+ + ++DGL  YRLIA ESDGLPGITID++
Sbjct: 61  IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF 120

Query: 120 QDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPP 179
            ++LV QLLSAGAEYQ+  L+ AL   +PEC IY+RSDVAVRKKEG++   G + GELPP
Sbjct: 121 GNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPP 180

Query: 180 KSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALK 239
             + IEE+G+K+ VDI  GHKTG+YLDQRDSR  + +YV+ K VLNCFSYTGGF + AL 
Sbjct: 181 ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM 240

Query: 240 GGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVV 299
           GG  +V++ D SQ ALD A+ N ELN  D+SK  A F+  DVFKLLR YRD+G +FDV+V
Sbjct: 241 GGCSQVVSVDTSQEALDIARQNVELNKLDLSK--AEFVRDDVFKLLRTYRDRGEKFDVIV 298

Query: 300 MDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAAL 359
           MDPPKF E+K+QL GACRGYKDINMLA+Q+LN GG LLT+SCSGLM   LFQKIIADAA+
Sbjct: 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAI 358

Query: 360 DAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL 397
           DAGRDV+F+E+F QAADHP    YPEG YLKGFAC+V+
Sbjct: 359 DAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM 396