Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Predicted SAM-dependent methyltransferases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  225 bits (574), Expect = 1e-63
 Identities = 143/399 (35%), Positives = 218/399 (54%), Gaps = 16/399 (4%)

Query: 3   PAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQIT 62
           P I L KG++ SL+R+H WVFS  I+      K G+ V V+S   ++L    Y   S IT
Sbjct: 5   PQITLKKGKEISLKRRHHWVFSGAIAHTAPDLKNGQLVSVFSHRQEFLGTGHYQKGS-IT 63

Query: 63  ARVWSFEQEPIDRDFFIKRIEQAQLLRNDI--IERDGLTGYRLIAAESDGLPGITIDKYQ 120
            R+ SFE + I+  F+ ++++ A  +R  I   +      YRL+  E D LPG+ ID Y 
Sbjct: 64  VRIISFEPKEINAAFWEEKLQNAYEMRAKIGLADNPATNVYRLVHGEGDQLPGLIIDHYH 123

Query: 121 DYLVCQLLSAGAEYQKQTLVEALLHCFPEC--HIYERSDVAVRKKEGLDERVGVLHGELP 178
              V Q  S G    ++ +  AL   + E    +Y++S   ++   G++ +   L+G   
Sbjct: 124 GTAVLQTHSVGMYQHREEISTALQTVYGEKLKAVYDKSAETLKGLAGIENQF--LYGA-- 179

Query: 179 PKSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYAL 238
           P + V+ ENG K  +D   G KTGF++DQR++R     Y + K+VLN F Y+GGF + AL
Sbjct: 180 PLTNVVLENGCKYEIDWEKGQKTGFFIDQRENRKLLGTYSQGKKVLNTFCYSGGFSIAAL 239

Query: 239 KGGAKRVINADVSQPALDTAKFNAELNG-FDISKKRAVFLNADVFKLLREYRDQGTRFDV 297
           + GA  V + D+S  A++  + N +LN  FD      V   ADV K +RE       +DV
Sbjct: 240 EAGAAEVHSVDISAKAIELTEKNLQLNRQFDGKHASKV---ADVVKYIREIEQD---YDV 293

Query: 298 VVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADA 357
           +V+DPP FA++      A + YK +N  A++ + PGG L T+SCS ++D+ LF   I  A
Sbjct: 294 IVLDPPAFAKNMKARHNAVQAYKRLNAEALKHIKPGGILFTFSCSQVVDKQLFAHTITAA 353

Query: 358 ALDAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKV 396
           A++ GR V+ +++  Q ADHP +  + E  YLKG    V
Sbjct: 354 AIEVGRSVRILQQLTQPADHPINAFHTETEYLKGLVLYV 392