Pairwise Alignments

Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  100 bits (249), Expect = 2e-25
 Identities = 66/176 (37%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 795 KLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIALLDIDHFKQIND 854
           KL         LS+ D LTGL N  ++   L   F + Q      +IAL+DIDHFKQIND
Sbjct: 172 KLSEHKRALSALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQSHATIALIDIDHFKQIND 231

Query: 855 RYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEFTILYVGDP-KQAWGYFEKLRCKIE 913
            + HI+GD  +  +S EL   + +     R+GG+EF ++    P +QA    E++R    
Sbjct: 232 THGHIVGDAVLRQLSLELRRNLRENDLAGRYGGDEFCVILPQMPMEQAAQVMERMRETFS 291

Query: 914 QVDLSAVAPGLNVTVSIGFADAQQAESYETV-LKLADHALLTAKKLGRNRVVKSEE 968
                 + P L V++SIG AD Q   +   + L  AD AL  AK  GRNRV  S+E
Sbjct: 292 NYRNPQI-PELRVSLSIGLADFQPVFTDAAMWLNAADRALYAAKDTGRNRVNMSDE 346