Pairwise Alignments

Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1400 a.a., Signal transduction histidine kinase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  101 bits (251), Expect = 4e-25
 Identities = 129/485 (26%), Positives = 202/485 (41%), Gaps = 68/485 (14%)

Query: 41  WTSTDGLPHNSINSIAQTRDGYLWFATWEGVVRYNGINFQVFD---RNPQTGMVDSGTRT 97
           + S +GLP NSI +I Q   GYLWF T +G+ +++G  F V+     NP +  +++    
Sbjct: 34  FNSQEGLPQNSILAILQDDMGYLWFGTDDGLAKFDGYQFTVYKHQFNNPNS--LNNNVIR 91

Query: 98  LLPMDNNGLLVAGARGSITHRQSYGWQSFRS-------APSLVNGALIDDAQNLWLA--I 148
            L  D NG +     G   +      +SF S               L+D   N+W++   
Sbjct: 92  GLAQDKNGYIWISTEGGGINIYDPTTESFCSLRNHALIGSKKTGPLLLDQQGNIWVSTLT 151

Query: 149 EGLGVVVRPYLGNNLYGPDRWLLTDASVYRLVKNQHGVIFAATDKGLYRFNDWQA---SA 205
           +G+  V  P+       P      D  V RL K  H   +   +  L   N WQ     +
Sbjct: 152 DGIYKVTVPH-------PTEDFGLDQLVGRL-KVTH---YTKDNSRLADNNIWQVYEDGS 200

Query: 206 MELPIGRYERINYISISLNQELVVATDQGVWINTEEGFQSLFVPLEKEVVTLAEQDRAGN 265
            ++ IG Y+          Q+L  AT     I      Q      E + V    +D  GN
Sbjct: 201 QQIWIGTYDH-------GAQKLDPATGAFSKITLSHRGQ------EVKSVKCFFEDGNGN 247

Query: 266 WWIGTVNRGI---ARLKNQQLQFLEPSRGLPYSRVLSWYQDIEGSVWVGTNAGIMRLRDA 322
            WIGT + G+    R  N  + F + S  L    + S+ Q  +G++W+GT  G +   + 
Sbjct: 248 MWIGTEHHGVFLKERDSNTYVPF-KTSSSLMGENITSFLQGQQGNIWIGTLGGGLFAYET 306

Query: 323 PFI-------NINSDKGLVGDYVRTLLPLDDRRVMVG--TSRGLSIIEEGLAH-SALMPQ 372
                     N +    L G  V T+L   +  + +G  +  GL+ I     H     PQ
Sbjct: 307 KTSTLFHYDDNPSDSYSLNGKSVYTMLEDKNGNLWIGMYSGEGLNKINPSSQHFEHYRPQ 366

Query: 373 VGARPSI----LSLAKADQQGEKVWVGTVQKGLLLWQNG--QLRPV-LDENNGLPSSEVR 425
            G + S+    +     D Q + +W+G    GL L  +G    RP+ L  +    S+ V+
Sbjct: 367 AGDKGSLSGKMVKSILIDHQ-KNLWIGMFNGGLDLKMDGSDNFRPIPLGGSTEQGSTNVQ 425

Query: 426 AIVTDPQDNLWIGT-SNGIVKRTPQ-GVLTTYN---KDNSPLPDDYIMALAVDSEGKLWV 480
            I  D +  LWIGT  +G+   +P    +  Y+    D++ L  D I A+A D  G+LW+
Sbjct: 426 VIFEDSRHQLWIGTDGSGLYLYSPSLSSIRAYHHDPHDSTSLSKDEIWAIAEDGSGRLWI 485

Query: 481 GSAVG 485
           G A G
Sbjct: 486 GMANG 490



 Score = 47.0 bits (110), Expect = 9e-09
 Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 25/270 (9%)

Query: 324 FININSDKGLVGDYVRTLLPLDDRRVMVGTSRGLSIIEEGLAHSALMPQVGARPSI---L 380
           F + NS +GL  + +  +L  D   +  GT  GL+   +G   +    Q     S+   +
Sbjct: 31  FTHFNSQEGLPQNSILAILQDDMGYLWFGTDDGLAKF-DGYQFTVYKHQFNNPNSLNNNV 89

Query: 381 SLAKADQQGEKVWVGTVQKGLLLWQNGQLRPVLDENNGL-PSSEVRAIVTDPQDNLWIGT 439
               A  +   +W+ T   G+ ++           N+ L  S +   ++ D Q N+W+ T
Sbjct: 90  IRGLAQDKNGYIWISTEGGGINIYDPTTESFCSLRNHALIGSKKTGPLLLDQQGNIWVST 149

Query: 440 -SNGIVKRT-PQGV-------------LTTYNKDNSPLPDDYIMALAVDSEGKLWVGS-A 483
            ++GI K T P                +T Y KDNS L D+ I  +  D   ++W+G+  
Sbjct: 150 LTDGIYKVTVPHPTEDFGLDQLVGRLKVTHYTKDNSRLADNNIWQVYEDGSQQIWIGTYD 209

Query: 484 VGVAYFD-AQGKIRPVDLT-KQEQAQYVFGFYMESD-YVWMATDRGIVRYRLSDASVSLV 540
            G    D A G    + L+ + ++ + V  F+ + +  +W+ T+   V  +  D++  + 
Sbjct: 210 HGAQKLDPATGAFSKITLSHRGQEVKSVKCFFEDGNGNMWIGTEHHGVFLKERDSNTYVP 269

Query: 541 GR-AAGLPIDKFFQMLRDSEGHVWLSSNRG 569
            + ++ L  +     L+  +G++W+ +  G
Sbjct: 270 FKTSSSLMGENITSFLQGQQGNIWIGTLGG 299



 Score = 38.5 bits (88), Expect = 3e-06
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 454 TYNKDNSPLPDDYIMALAVDSEGKLWVGSAVGVAYFDA-QGKIRPVDLTKQEQA--QYVF 510
           T+      LP + I+A+  D  G LW G+  G+A FD  Q  +               + 
Sbjct: 32  THFNSQEGLPQNSILAILQDDMGYLWFGTDDGLAKFDGYQFTVYKHQFNNPNSLNNNVIR 91

Query: 511 GFYMESD-YVWMATDRGIVR-YRLSDASVSLVGRAAGLPIDKFFQMLRDSEGHVWLSS-N 567
           G   + + Y+W++T+ G +  Y  +  S   +   A +   K   +L D +G++W+S+  
Sbjct: 92  GLAQDKNGYIWISTEGGGINIYDPTTESFCSLRNHALIGSKKTGPLLLDQQGNIWVSTLT 151

Query: 568 RGVWKL 573
            G++K+
Sbjct: 152 DGIYKV 157