Pairwise Alignments
Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1360 a.a., His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Y_Y_Y domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Two component regulator propeller./Bacterial regulatory helix-turn-helix proteins, AraC family. from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 134 bits (337), Expect = 4e-35
Identities = 195/832 (23%), Positives = 330/832 (39%), Gaps = 124/832 (14%)
Query: 46 GLPHNSINSIAQTRDGYLWFATWEGVVRYNGINFQVFDRNPQ-TGMVDSGTRTLLPMDNN 104
GL +N++ +I Q + G++W T++G+ RY+G +F VF P+ T + + D N
Sbjct: 42 GLSNNAVTAIYQDKKGFVWIGTYDGLNRYDGYDFLVFRNQPRDTSSLVHNRIVSIYGDRN 101
Query: 105 GLLVAGARGSITHRQSYGWQSFRSAPSLVNGALIDDAQNLWLAIEGLGVVVRPYLGNNLY 164
+ V RG Y + + + L I N++
Sbjct: 102 EVWVGTKRGLSV----YDYHTGKFQARYYEDPKTKRRHKLTANI------------NHIT 145
Query: 165 GPDRWLLTDASVYRLVKNQHGVIFAATDKGLYRFNDWQASAMELPIGRYERINYISISLN 224
G D ++ + GV+ A L R W A RY + +++
Sbjct: 146 GRDGKIVVATA-------GQGVMVRADGGPLSRVPLWDAGK------RYYDYHAQGAAVD 192
Query: 225 QELVV-ATDQGVWINTEEGFQSLFVPLEKEV--VTLAEQDRAGNWWIGTVNRGIARLKNQ 281
++ V A QG + + S F + K++ E D GN WIG+ + G+AR Q
Sbjct: 193 KDHNVWAFIQGYGLAVRKEEDSCFKVVLKDIKSANCIELDSEGNIWIGS-DYGLARFHVQ 251
Query: 282 QLQ-FLEPSRGLPYSRVLSWYQDIEGSVWVGTNA-GIMRLRDAPFININSDKGLV-GDYV 338
Q +L P++ +G +WV T+ G++ L + +G V D V
Sbjct: 252 QKDWYLYPAQITKNKITDIMNVADDGQIWVATDGNGLLVLEKGSEKSYFLKEGTVPSDLV 311
Query: 339 RTL---LPLDDR-RVMVGTSRG-LSIIEEGLAHSALMPQ----VGARPSILSLAKADQQG 389
L LD + R VGT RG ++I+E+ + V PS L+ G
Sbjct: 312 SNAVYGLALDRQGRKWVGTLRGGVNILEKKQNRFVTVHNPDNLVNGLPSDFILSFCQTSG 371
Query: 390 EKVWVGTVQKGLLLWQNGQ-----LRPVLDENNGLPSSEVRAIVTDPQDNLWIGTSNGIV 444
+ +WVGT G+ +W + R + LP+ V AIV + ++NLW+ T G V
Sbjct: 372 DSLWVGTDGGGVSIWDRKRDRYTNYRHRSGKPGSLPNDFVTAIV-ERENNLWLATYGGGV 430
Query: 445 KR--TPQGVLTTYNKDNSP-LPDDYIMALAVDSEGKLWVGSAVGVAYFDAQGKIRPVD-- 499
R + Y N + YI L D G LW ++ G + G+ D
Sbjct: 431 CRYDSRADAFVPYTLSNPEGMAHWYIWVLFKDRSGDLWAATSNGEGLYRYNGQKDRFDFV 490
Query: 500 ---------LTKQEQAQYVFGFY---------MESDY-------------------VWMA 522
+ + Y G + +E D+ + +A
Sbjct: 491 DVGIYGIISMAQDHNGDYWVGTFDHLVKLDLSVEQDHEVIDIGYPVRDIMSLGPEDLLVA 550
Query: 523 TD-RGIVRYRLSDASVSLVGRAAGLPIDKFFQMLRDSEGHVWLSSNRGVWKLNYDQMLAV 581
T+ GI R+ + + GLP + +M+ D G +W+S+ +G+ K + +
Sbjct: 551 TEGSGIWRFDSGQGTAKTYLQEEGLPNNSVLKMVGDRNGKIWMSTYKGLAKFDPEGE--- 607
Query: 582 ADGMSTQLEFEHFDEGDGMATSQANGGTNPASASLPNGELLFATAKGVASIKVQRLQQLS 641
+F F DG+ ++Q N A L +G+L F KG I L Q S
Sbjct: 608 --------KFTSFFASDGLQSNQFNYN---AGIRLDDGKLAFGGIKGFNLI--DPLHQKS 654
Query: 642 ELRLPVV-LESVSFDSEIINPDQQYIAAAGT-------NRVSFGYVGLGFVMSERLQYRT 693
E P + L + +++ +PD + I A + VS ++ L + E++ Y
Sbjct: 655 EGSFPHIHLTQLRVNNQPGHPDGKTIFALDKLELPYDQSMVSLDFLALEYAHPEKIAYAY 714
Query: 694 KLEGFDRDWSYRGHNTQAEYTNLAPGKYRFFVSARYPYGEWNDATFSYVFIIEPHWWQRK 753
+EG+D W + ++ A Y+ L G+Y F V A GEW+ S I P W++
Sbjct: 715 HMEGWDEKWHFVKNSRMANYSKLREGEYTFHVRATNAQGEWSPQVVSLPISILPPWYRTW 774
Query: 754 EVIVMAGMLFLALAVSLVMWRIRILKRRELYLVEQVALQTQKLRLQAEKFER 805
+ ++ LA LV++ +R++ L QV+L + R + E E+
Sbjct: 775 WAYGLYSVIVGGLAGILVLY-----QRKQDKLKYQVSLSREMARREKELNEK 821
Score = 65.1 bits (157), Expect = 3e-14
Identities = 85/370 (22%), Positives = 147/370 (39%), Gaps = 64/370 (17%)
Query: 36 YFVETWTSTDGLPHNSINSIAQTRDGYLWFATWEGVVRY--NGINFQVFDRNPQ---TGM 90
YF++ T L N++ +A R G W T G V N V NP G+
Sbjct: 299 YFLKEGTVPSDLVSNAVYGLALDRQGRKWVGTLRGGVNILEKKQNRFVTVHNPDNLVNGL 358
Query: 91 VDSGTRTLLPMDNNGLLVA--GARGSITHRQSYGWQSFR-------SAPSLVNGALIDDA 141
+ + L V G SI R+ + ++R S P+ A+++
Sbjct: 359 PSDFILSFCQTSGDSLWVGTDGGGVSIWDRKRDRYTNYRHRSGKPGSLPNDFVTAIVERE 418
Query: 142 QNLWLAIEGLGV--------VVRPYLGNNLYGPDRWLLTDASVYRLVKNQHGVIFAATD- 192
NLWLA G GV PY +N G W ++ L K++ G ++AAT
Sbjct: 419 NNLWLATYGGGVCRYDSRADAFVPYTLSNPEGMAHWY-----IWVLFKDRSGDLWAATSN 473
Query: 193 -KGLYRFNDWQASAMELPIGRYERINYISISLNQELVVATDQG--VWINTEEGFQSLFVP 249
+GLYR+N G+ +R +++ + + + +A D W+ T + L +
Sbjct: 474 GEGLYRYN-----------GQKDRFDFVDVGIYGIISMAQDHNGDYWVGTFDHLVKLDLS 522
Query: 250 LE------------KEVVTLAEQDRAGNWWIGTVNRGIARLKNQQ--LQFLEPSRGLPYS 295
+E +++++L +D + T GI R + Q + GLP +
Sbjct: 523 VEQDHEVIDIGYPVRDIMSLGPEDLL----VATEGSGIWRFDSGQGTAKTYLQEEGLPNN 578
Query: 296 RVLSWYQDIEGSVWVGTNAGIMRL--RDAPFININSDKGLVGDY--VRTLLPLDDRRVMV 351
VL D G +W+ T G+ + F + + GL + + LDD ++
Sbjct: 579 SVLKMVGDRNGKIWMSTYKGLAKFDPEGEKFTSFFASDGLQSNQFNYNAGIRLDDGKLAF 638
Query: 352 GTSRGLSIIE 361
G +G ++I+
Sbjct: 639 GGIKGFNLID 648
Score = 62.4 bits (150), Expect = 2e-13
Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 29/314 (9%)
Query: 277 RLKNQQLQFLEPSRGLPYSRVLSWYQDIEGSVWVGTNAGIMRLRDAPFININSD----KG 332
RL + ++ GL + V + YQD +G VW+GT G+ R F+ +
Sbjct: 28 RLTGYERNYIGIESGLSNNAVTAIYQDKKGFVWIGTYDGLNRYDGYDFLVFRNQPRDTSS 87
Query: 333 LVGDYVRTLLPLDDRRVMVGTSRGLSIIE----EGLAHSALMPQVGARPSI-LSLAKADQ 387
LV + + ++ D V VGT RGLS+ + + A P+ R + ++
Sbjct: 88 LVHNRIVSIYG-DRNEVWVGTKRGLSVYDYHTGKFQARYYEDPKTKRRHKLTANINHITG 146
Query: 388 QGEKVWVGTVQKGLLLWQNG---QLRPVLDENNGLPSSEVRAIVTDPQDNLW--IGTSNG 442
+ K+ V T +G+++ +G P+ D + D N+W I
Sbjct: 147 RDGKIVVATAGQGVMVRADGGPLSRVPLWDAGKRYYDYHAQGAAVDKDHNVWAFIQGYGL 206
Query: 443 IVKRTPQGVLTTYNKDNSPLPDDYIMALAVDSEGKLWVGSAVGVAYFDAQGK---IRPVD 499
V++ KD + +DSEG +W+GS G+A F Q K + P
Sbjct: 207 AVRKEEDSCFKVVLKDIKS-----ANCIELDSEGNIWIGSDYGLARFHVQQKDWYLYPAQ 261
Query: 500 LTKQEQAQYVFGFYMESDYVWMATDRGIVRYRLSDASVSLVGRAAGLPID----KFFQML 555
+TK + + + +W+ATD + + S + +P D + +
Sbjct: 262 ITKNKITDIM--NVADDGQIWVATDGNGLLVLEKGSEKSYFLKEGTVPSDLVSNAVYGLA 319
Query: 556 RDSEGHVWLSSNRG 569
D +G W+ + RG
Sbjct: 320 LDRQGRKWVGTLRG 333