Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  306 bits (783), Expect = 7e-87
 Identities = 233/678 (34%), Positives = 349/678 (51%), Gaps = 40/678 (5%)

Query: 581  LDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTT 640
            L+  E + +E +L + KEA +A S+ K +FLANMSHEIRTP+N ILG  HL   + L   
Sbjct: 261  LETIEIQNIELDLAR-KEALEA-SRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPR 318

Query: 641  QRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEK 700
            Q  Y+  I +SA NLLGIIN+ILDFSK+EAGKL ++ I FNL D+L +   +++  A  K
Sbjct: 319  QLDYLGTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAK 378

Query: 701  GIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLR 760
             +E +  +    PL L+GDPLRL Q++ NL  NA+KFT +G IV  A +    E  V LR
Sbjct: 379  QLELVSLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLR 438

Query: 761  FAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEE 820
             +V+DTGIG++   +  LF AFSQADNS++RQ GGTGLGL ISK+L+E MGG+I V S  
Sbjct: 439  ISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTP 498

Query: 821  GKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHIL-----DSLLTAMR 875
            G+GS F  S+        + D+  P   L   RV V+++++ AR  L     D  L    
Sbjct: 499  GEGSEFWISLNLPKTRDDVEDL--PSAPLLGHRVAVLENHELARQALQHQLEDCGLEVTP 556

Query: 876  FN-VVTVSNGFEALSEIQQK-PFDMLFVDWN-MPGMNGIELLTRVKTLGLRGHMKSFLVT 932
            FN + +++NG  +  + +Q     +L V  N +P     + L  ++ LG +  +      
Sbjct: 557  FNSLESLTNGITSAHQTEQAIDLAVLGVTANDIPPERLNQHLWDLEHLGCKVLVLCPTTE 616

Query: 933  AYGREINLDGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQ 992
                  ++   NS+L      KP     L  A+         R +  E   +  P     
Sbjct: 617  QMLFNQSVPNPNSQLQ----AKPACTRKLRRALSDLISPRPSRSEPGEPLSSRAPR---- 668

Query: 993  SLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGIT 1052
             +L V+DN  N  +   LL+D G  V     G  A++ ++   FDLVLMD+QMP MDG  
Sbjct: 669  -VLCVDDNPANLLLVQTLLEDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDGRQ 727

Query: 1053 ATEHIRANPRWHS------LPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLR 1106
            +TE IR   +W S      LP+VA+TA+AMA +    LQ+GM+D+L+KPI   +  QV+ 
Sbjct: 728  STEAIR---QWESERSGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVL 784

Query: 1107 HFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRH 1166
             +  +    +  +  P +        + L    QL  +D E+ +    G      ++L  
Sbjct: 785  KWTGL----ALRNQGPER------VADGLGPGVQLPVLDHEEGLRLAAGKADLAADMLAM 834

Query: 1167 FIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLP 1226
             + S   +  ++T   +A D ++     H L G+    G+  L       E  L+Q    
Sbjct: 835  LLASLEADRLAITIARDANDNNALIERVHRLHGATRYCGVPQLRAACHRAETLLKQDDAK 894

Query: 1227 SFELLQQAQSLLTQVDDE 1244
            +   L +    + ++  E
Sbjct: 895  AQHALDELDMAIARLASE 912