Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  247 bits (630), Expect = 5e-69
 Identities = 171/533 (32%), Positives = 278/533 (52%), Gaps = 36/533 (6%)

Query: 418  NQPIALLELGTVGMLTMQQYHWLSQMLDDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEI 477
            N  IA + +GT G+L +    W + M           +  + +R+AER + +Q +  + +
Sbjct: 542  NDLIAQIIIGT-GLLLLISLAWNAYM----------RRQIQHRRMAERALNDQFEFMRAL 590

Query: 478  LDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKEPQEIFPA--EVAERFAAAHQV 535
            ++ TP+P+Y    +G   T N  +L +  +   +VI K   +I  A    A ++ A +Q 
Sbjct: 591  VNETPHPIYVRDRNGLLQTCNDSYLQVFDVKREDVIGKSALQISTALETEASQYHADYQR 650

Query: 536  LTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRK 595
            +  Q +    +  L    G +  +  +   + D   +V GI+G  +D++ER+++ DELR 
Sbjct: 651  VVAQGNPLIVDRPL-HIRGKKLTIYHWILPYRDSTGEVQGIIGGWIDISERRQLFDELRA 709

Query: 596  AKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLAL-NTPLDTTQRKYVTRINESAKN 654
            AKE AD  ++AK  FLA MSHEIRTPMNA++GM  L L         R  +     SAK+
Sbjct: 710  AKERADEANRAKSTFLATMSHEIRTPMNAVIGMLELTLKRADQGHLDRPAIEVAYHSAKD 769

Query: 655  LLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHI-P 713
            LL +I DILD +++E+G+L++     NL DV+++V  V    A++K +  L++  P +  
Sbjct: 770  LLELIGDILDIARIESGRLSLSPERVNLKDVIESVVRVFDGLARQKTLSLLLEFKPGLDD 829

Query: 714  LGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLN-EQQVTLRFAVKDTGIGIAQ 772
              ++ DPLR  QV+ NL  NA+KFT +GE+ +   V   +  QQV ++  V+DTGIGI++
Sbjct: 830  TDVLIDPLRFKQVLSNLVSNAIKFTERGEVKVKVEVHATDLPQQVEMKLVVEDTGIGISR 889

Query: 773  DKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVC 832
            +    LF+ FSQADNS      G GLGL I + L  +MGGQ+++ S    G+    S+  
Sbjct: 890  EDQLRLFEPFSQADNSGHLARSGAGLGLVICRSLCAMMGGQLSLSSVPMVGTQVYVSL-- 947

Query: 833  GLQDAKMRDISQPVHGLADKR-----------VLVVDDNDSARHILDSLLTAMRFNVVTV 881
                 KM  + QPVH + + +           VLVVDD+ + R ++   L  +       
Sbjct: 948  -----KMHSL-QPVHAVEEPKPATPTPAPVLNVLVVDDHPANRLLMCQQLGYLGHQFTAA 1001

Query: 882  SNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAY 934
             +G       +Q+ FD++  D NMP MNG EL   ++    R  +   ++  +
Sbjct: 1002 QHGAAGFQAWRQEHFDLVIADCNMPIMNGYELSRSIREYEQREQLPPCVILGF 1054



 Score = 73.9 bits (180), Expect = 8e-17
 Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 31/230 (13%)

Query: 993  SLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGIT 1052
            ++L+V+D+  N+ +    L   G     A HG    +      FDLV+ D  MP+M+G  
Sbjct: 973  NVLVVDDHPANRLLMCQQLGYLGHQFTAAQHGAAGFQAWRQEHFDLVIADCNMPIMNGYE 1032

Query: 1053 ATEHIRANPRWHSLP---IVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
             +  IR   +   LP   I+  TANA   +  RC +AGMND L KPI +           
Sbjct: 1033 LSRSIREYEQREQLPPCVILGFTANAQPEEKRRCAEAGMNDCLFKPISLTIL-------- 1084

Query: 1110 QVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFID 1169
                E+  +   P+  S        LLDL  L  +         GG+ Q    +L   + 
Sbjct: 1085 ----ERQLAQIGPHPTS-------TLLDLSSLDAL--------TGGDPQLSRRLLEELLS 1125

Query: 1170 SQVDELNSVTGLIEAQ-DWSSATRVAHTLKGSAANLGLEALAQLAAEMEQ 1218
            S   +   +  L+  Q         AH +KG+A  +    LA     +EQ
Sbjct: 1126 SSAHDRQEIIALVARQAPLQDIIEQAHKIKGAARIVQASVLAAQCEALEQ 1175