Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  275 bits (704), Expect = 1e-77
 Identities = 189/573 (32%), Positives = 309/573 (53%), Gaps = 38/573 (6%)

Query: 576  IVGILLDM--TERKEMEDELR----KAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMA 629
            + G+LL++  +ER     E R    +A  A+DA   AK +FLA +SHEIRTPMN +LGM 
Sbjct: 361  VSGLLLNLAVSERLRRISEERFSASRALAASDAEINAKAEFLAKISHEIRTPMNGVLGMT 420

Query: 630  HLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNV 689
             L L TPL   QR YV  I+ +   LL +IN+ILD SK+E+ ++ ++ + F+L+ ++++ 
Sbjct: 421  ELLLGTPLSVKQRDYVQTIHSAGNELLTLINEILDISKLESRQIELDDVQFDLNALIEDC 480

Query: 690  TAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARV 749
              +   KA+++ IE +    P +P  + GDP RL Q + +L  NA+K T QGEI+L   +
Sbjct: 481  LNIFRAKAEQQNIELISFTQPQVPRVISGDPTRLRQALSSLLENALKNTDQGEILLVVAL 540

Query: 750  SQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVEL 809
             Q  E    LR AV+D+G  +     + L  A   + + ++    G  LGL I+KQL+ L
Sbjct: 541  DQRGEVP-RLRIAVQDSGEPLPAADREALLQAELHSHHFLSSNKLGGHLGLVIAKQLIGL 599

Query: 810  MGGQITVHSEEGKGSTFEFSVVCGLQDAKMR----DISQPVHGLADKRVLVVDDNDSARH 865
            M G+  + S  G G+T   ++   L  +++     D+  P   L D RVLVVDDND+ R 
Sbjct: 600  MQGEFGIKSSTGMGNTLWLTL--PLDPSRLEQPPADLDSP---LRDARVLVVDDNDTCRK 654

Query: 866  ILDSLLTAMRFNVVTVSNGFEALSEIQQKP-----FDMLFVDWNMPGMNGIELLTRVK-T 919
            +L    +A   NV  V +G EAL+ ++ K      FD + +D NMPGM G++L  ++K  
Sbjct: 655  VLVQQCSAWGMNVSAVPSGKEALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKED 714

Query: 920  LGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTN 979
              L   +   ++T      +     +  V  ++ KPV    L     T+   E  +    
Sbjct: 715  PSLNHDILVVMLTGISNAPSKVIARNAGVKRILAKPVAGYTL----KTTLAEELAQRGRE 770

Query: 980  EAHHNSRPNF-------AGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLE 1032
            +A   S P             +L+ EDN ++ +V   +L    L    A +G+EAL+ ++
Sbjct: 771  QAMPASLPGIPQALDLPGDFRVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMK 830

Query: 1033 HADFDLVLMDMQMPVMDGITATEHIRA----NPRWHSLPIVAMTANAMAIDIERCLQAGM 1088
               +DLVLMD +MP++DG +AT+ +RA    N R  + P+VA+TA+ +A   ER   AGM
Sbjct: 831  AQHYDLVLMDCEMPILDGFSATQQLRAWEAENQRQRT-PVVALTAHILAEHKERARLAGM 889

Query: 1089 NDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHS 1121
            + H++KP+E+ +  ++++++    + +   +H+
Sbjct: 890  DGHMAKPVELSQLRELIQYWANHREAKVDPAHT 922



 Score = 35.4 bits (80), Expect = 2e-05
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 385 PYAMKSLNGNFQVVSTSGVIALNEVYYLPLQVNNQPIALLELGTVGMLTMQQYHW 439
           P   + L G   +V  SG++ L   +   L +N    AL+ LG+V ML +  YHW
Sbjct: 261 PRLNRLLQGEMLIVGLSGLVLL---FVDTLPLNLMTYALMALGSVSMLLVSSYHW 312