Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  254 bits (649), Expect = 2e-71
 Identities = 153/435 (35%), Positives = 245/435 (56%), Gaps = 17/435 (3%)

Query: 533 HQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMT-ERKEMED 591
           H V   QQ   N  + +VD           ++     A  +N +   L   + E+K+   
Sbjct: 201 HAVKAIQQGEYNTPLPVVD-----------DSELGHLARHINNLASALEQASDEQKQAIA 249

Query: 592 ELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINES 651
           EL +A+E A+  ++AK DFLA MSHE+RTPMN +LGM  L   TPL + Q  Y    +ES
Sbjct: 250 ELIQAREEAEQANRAKSDFLAMMSHELRTPMNGVLGMLQLLETTPLSSEQADYTAVASES 309

Query: 652 AKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPH 711
             +LL +INDILDFS++E   L +E IDFNL +++ N        AQ++G+   + +   
Sbjct: 310 TGHLLKVINDILDFSRIERAALQLEHIDFNLGELITNSVQSFQHSAQQRGLGLHLQLPAG 369

Query: 712 IP-LGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGI 770
           I  L + GDP R+ Q+++NL GNA+KFT +G++ + AR   L+ Q + L  +V+DTGIGI
Sbjct: 370 IEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQVDARWQVLDRQLIWLTCSVRDTGIGI 429

Query: 771 AQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSV 830
             D+L+ +F AF QAD+SI+R+YGGTGLGLSI++ L E MGG++   S EG GSTF   +
Sbjct: 430 DSDRLEMMFVAFQQADSSISRRYGGTGLGLSIARTLAERMGGKLRGESREGLGSTFTLEM 489

Query: 831 VCGLQDAKMRDISQPVHGLA----DKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFE 886
              L +     ++ P         + +VL+V+DN   R +++++L ++   V T  +G E
Sbjct: 490 PLALANPAPVPLTPPTTVRTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLE 549

Query: 887 ALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSK 946
           A+  + ++ F  + +D  +P ++G E   R++ L     +    +TA   + + +   + 
Sbjct: 550 AVELVGRQRFAAVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTANALQGDRERCMAA 609

Query: 947 LVDALIVKPVNPSNL 961
            +D  + KP+  + L
Sbjct: 610 GMDDYLSKPLRRTEL 624



 Score =  102 bits (255), Expect = 9e-26
 Identities = 55/116 (47%), Positives = 74/116 (63%)

Query: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053
            +LLVEDN VN+ V   +L+  GL V  A  G EA+E +    F  VLMD ++P +DG  A
Sbjct: 517  VLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEA 576

Query: 1054 TEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
            T  IR  P    LPI+A+TANA+  D ERC+ AGM+D+LSKP+   +  QVL+ +L
Sbjct: 577  TRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQRWL 632