Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  278 bits (712), Expect = 1e-78
 Identities = 196/534 (36%), Positives = 282/534 (52%), Gaps = 53/534 (9%)

Query: 592  ELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINES 651
            EL +A+  A  M+QA+  FLANMSHEIRTP+N +LGM  LAL+ PL + QR+ +   ++S
Sbjct: 291  ELEQARSRALDMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQQLAIAHDS 350

Query: 652  AKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPH 711
             K L+ ++NDILD SK +AG+L +ERI F++  ++++   ++S    +  +E    I   
Sbjct: 351  GKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQNTAQ-SVELTCLIASD 409

Query: 712  IPLGLIGDPLRLGQVMVNLCGNAVKFTSQG--EIVLSARVSQLNEQQVTLRFAVKDTGIG 769
             P  ++GDP R+ Q++ NL  NA+KFT  G  ++ L+A V         +R  V+DTGIG
Sbjct: 410  FPSSVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLAAIVG-------GVRLEVRDTGIG 462

Query: 770  IAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFS 829
            I +D    +F  F+QA   ITRQYGGTGLGL++++ L + M G + + SE G GS F   
Sbjct: 463  IPEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFGSCFTAE 522

Query: 830  VVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSA-RHILDSLLTAMRFNVVTVSNGFEAL 888
            +   +    +     P+HG    RV  +    S    +L  LL A            ++ 
Sbjct: 523  LPLTVHTEAIP--PAPLHG----RVAALSAAGSGLNELLQHLLPAWGLTY----QRHDSC 572

Query: 889  SEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLV 948
            + +     D+L  D      +  EL   +KT          LVTAYG    L  E S  +
Sbjct: 573  ATLVAAVIDLLITD---DVEHLFELRPALKT-------PILLVTAYGN--FLPNEQSLAL 620

Query: 949  DAL--IVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRP--------NFAGQSLLLVE 998
              L  + +P+  + L   +           +T + H    P              +LLVE
Sbjct: 621  APLHQLARPLARNALYQTL----------RRTLQGHEPEHPLAIPAITQEQGRARILLVE 670

Query: 999  DNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIR 1058
            DN VNQ VA G+L   G  V +A  G EALE L   +FDLVLMD  MPVMDG  A+  IR
Sbjct: 671  DNPVNQLVAKGMLAKLGCQVQLATQGAEALELLAREEFDLVLMDCNMPVMDGYEASRRIR 730

Query: 1059 ANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVS 1112
             + RW  LPIVA+TANAM  + ERC  AGMND+L+KP   ++   ++ H++  S
Sbjct: 731  QSGRWPELPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHWVPFS 784



 Score = 26.9 bits (58), Expect = 0.007
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 8/61 (13%)

Query: 1067 PIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPS 1126
            PI+ +TA    +  E+ L       L++P+  +  YQ LR  LQ         H P  P 
Sbjct: 601  PILLVTAYGNFLPNEQSLALAPLHQLARPLARNALYQTLRRTLQ--------GHEPEHPL 652

Query: 1127 A 1127
            A
Sbjct: 653  A 653