Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  390 bits (1001), Expect = e-112
 Identities = 248/638 (38%), Positives = 359/638 (56%), Gaps = 35/638 (5%)

Query: 594  RKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAK 653
            R+A++ A+  +QAK  FLA MSHEIRTPMN ++GM  L L+T LD  QR + T I +SA+
Sbjct: 243  RQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDPEQRHFATTIRDSAE 302

Query: 654  NLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIP 713
            +LL +INDILDFSK+EAGKL++E  DF L  +++++  +++ +A  KGIE    +DP +P
Sbjct: 303  SLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIEIASMVDPDLP 362

Query: 714  LGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQD 773
              + GDP RL Q+++NL GNA+KFTS G I +  R     +    LRF V+DTGIGI QD
Sbjct: 363  AWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGRLRFDVRDTGIGIPQD 422

Query: 774  KLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCG 833
             +  LF  F Q D S  R+YGGTGLGL+ISK+L E+MGG I V S  G GS F FS+   
Sbjct: 423  AIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGAGSLFWFSL--- 479

Query: 834  LQDAKMRDISQPVH-GLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQ 892
                +M + + P    LA +R+LVVDD+   R +L+  L      V + ++   AL+E+ 
Sbjct: 480  --PFQMVETAPPQRPDLAGRRILVVDDSPINRDVLERQLRGFGVIVASCADAESALAELG 537

Query: 893  Q-----KPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKL 947
            +      P++   +D  MPG+ G +L+ R++   +   M   + ++ G       + S  
Sbjct: 538  RAAATGTPWEAAIIDARMPGVTGSDLIGRIRAEPVLAPMGLIIASSQGLS---PEDGSPK 594

Query: 948  VDALIVKPVNPSNLLDAIVTSYGIEH--VRHKTNEAHHNSRPNFAGQ-SLLLVEDNEVNQ 1004
             DA I KP+    +L  +    G+ H      + E+   + P  A +  +L+ EDN VNQ
Sbjct: 595  ADAFIHKPLRRQTILAVLARVLGLPHDPGLQDSPESEPEAIPRPARRLRILVAEDNPVNQ 654

Query: 1005 EVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRA-NPRW 1063
            +VA+GLL+  G +V VA  G EA+E +    +DLVLMD+QMP MDG+ AT  IRA     
Sbjct: 655  QVAVGLLRKLGHSVDVAADGAEAVEAVRSRPYDLVLMDVQMPEMDGLQATAAIRALTGGA 714

Query: 1064 HSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPN 1123
              +PIVAMTANAM  D   CL AGM+ ++SKPI+  K  +VL  +       +    +  
Sbjct: 715  ERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLAQY-------AAEPPAAK 767

Query: 1124 KPSASKPAMNAL-LDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLI 1182
             P A  PA +A+ +D+  L   DL           +   EIL  F +            +
Sbjct: 768  PPQAENPAPSAVEIDVLDLLCEDL---------GVETVVEILAKFFEDATSREAECAAAL 818

Query: 1183 EAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSL 1220
              +D     R AH +KG+AA+LGL  + + A  ME ++
Sbjct: 819  AREDHERVRREAHAIKGAAASLGLTDIRRTAEAMEAAV 856