Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1021 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  260 bits (665), Expect = 4e-73
 Identities = 181/532 (34%), Positives = 270/532 (50%), Gaps = 22/532 (4%)

Query: 591  DELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINE 650
            + L  AKE A+A + AK  FLA MSHEIRTPMN ++GM  L  +T LD  QR  V+   E
Sbjct: 493  EALTIAKENAEAANVAKSAFLAAMSHEIRTPMNGVIGMLELLDHTELDNDQRDLVSTTRE 552

Query: 651  SAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDP 710
            S  +LL I++D+LDFSK+EAG+L +E++   LD ++++V   V+  A  K +     +DP
Sbjct: 553  SGLSLLRILDDVLDFSKIEAGRLELEQVPVRLDRIVESVVQTVAPAAAAKSLTLSAFVDP 612

Query: 711  HIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQ-QVTLRFAVKDTGIG 769
             +P  L+ DP+RL Q++ NL GNAVKFT+QG + +       + Q +  L   V DTGIG
Sbjct: 613  GLPPVLLADPVRLRQILFNLAGNAVKFTAQGLVAIHMGNGGTDGQGRQILSIRVADTGIG 672

Query: 770  IAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFS 829
            I     D LF  F+QA++S TR++GGTGLGLSI+++LV+LM G     SE G GS+F   
Sbjct: 673  IDSSLRDRLFQPFTQAESSTTRRFGGTGLGLSITRRLVDLMDGTAGFESEPGVGSSFWCR 732

Query: 830  VVCGLQDAKMRD--ISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEA 887
            +   + ++   +  I +        R+L+VD +   R ++          VV V    EA
Sbjct: 733  LPLPVAESVPPETPIGEQTTDFIGLRILIVDPDTEERTLIALATEQGGAAVVRVPGPREA 792

Query: 888  -----LSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDG 942
                  +   Q PFD+  +  +      +  +     L + G   +           L+ 
Sbjct: 793  EAASRKATATQAPFDLALITADSVAPEDLAPMGTTPLLFIDGQDPA-------HRFQLER 845

Query: 943  ENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPN---FAGQSLLLVED 999
              + L    + +P+  + +  A+    G                P    + G  +L+ ED
Sbjct: 846  RPNCL--GFLGRPLTRAQITAAVERIIGPVAQPRPVCAPLPQPEPRSTAWTGAPILVAED 903

Query: 1000 NEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRA 1059
            + VNQ+V    L   G    V   G  AL       + L+L D  MP+MDG   T  IRA
Sbjct: 904  HPVNQQVIRRQLHLLGFPAEVFPDGAAALAAWRARPYCLILTDCHMPIMDGFQLTAAIRA 963

Query: 1060 --NPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
              +      PI+A+TANA+A + ERC+QAGM+ +LSKP+E+      + H L
Sbjct: 964  EEDGTTRHTPILALTANALAGEAERCVQAGMDSYLSKPVELPHLRAAISHLL 1015