Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 919 a.a., Uncharacterized domain of BarA-like signal transduction histidine kinases from Enterobacter asburiae PDN3

 Score =  332 bits (851), Expect = 1e-94
 Identities = 229/693 (33%), Positives = 354/693 (51%), Gaps = 26/693 (3%)

Query: 554  GVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMED-ELRKAKEAADAMSQAKGDFLA 612
            G+    +   A   +    V+     L +  E+ E+++ EL  AK+ A   ++ K +FLA
Sbjct: 239  GINSMAMSLAAYHEEMQHNVDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLA 298

Query: 613  NMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGK 672
            NMSHE+RTP+N ++G   L L + L+ TQR ++  I  SA NLL IIND+LDFSK+EAGK
Sbjct: 299  NMSHELRTPLNGVIGFTRLTLKSELNPTQRDHLHTIERSANNLLAIINDVLDFSKLEAGK 358

Query: 673  LNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCG 732
            L +E I F L   LD V  +++  + +KG+E  ++I   +P  +IGDPLRL QV+ NL G
Sbjct: 359  LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVG 418

Query: 733  NAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQ 792
            NA+KFT  G I +      ++  +V +   ++DTGIGI +     LF AF QAD SI+R+
Sbjct: 419  NAIKFTESGNIDILVEKRSISSNKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRR 478

Query: 793  YGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADK 852
            +GGTGLGL I+++LV  MGG I+ HS+  +GSTF F +   L    + D       L  K
Sbjct: 479  HGGTGLGLVITQRLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVLTD-GPVTDCLKGK 537

Query: 853  RVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIE 912
            R+  V+ N +A      +L+     VV  S  F AL+    + +D+L +   +P     E
Sbjct: 538  RLAYVEPNAAAAQCALDILSTTPLEVV-YSPTFSALA---VEHYDILLM--GIPVTFTGE 591

Query: 913  LLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKL--VDALIVKPVNPSNLLDAIVTSYG 970
            L  + + L     M  +L+ A      ++ E  K     A ++KP+  + LL A+     
Sbjct: 592  LTMQQERLAKAASMTDYLLLALPCHAQINAEELKNDGAAACLLKPLTSTRLLPALT---- 647

Query: 971  IEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALER 1030
             E+ R   +             S++ V+DN  N ++   LL+D   +V +   G +A+E+
Sbjct: 648  -EYCRLSQHALPLIDDEQKLPMSVMAVDDNPANLKLIGALLEDQVQHVELCTSGAQAVEQ 706

Query: 1031 LEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMND 1090
             +   FDL+LMD+QMP MDGI A E I   P     P++A+TA+AMA   E+ L AGMND
Sbjct: 707  AKQMQFDLILMDIQMPGMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMND 766

Query: 1091 HLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAI 1150
            +L+KPI+ +K + +L  +           H     + S   +   + + Q    D + A+
Sbjct: 767  YLAKPIDEEKLHNLLLRYK--------PGHIGGTYTVSSEPVE--ISVNQNATFDWQLAL 816

Query: 1151 FRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALA 1210
             +  G      E+L+  +    +  N V   +  ++        H L GS    G+  L 
Sbjct: 817  RQAAGKPDLAREMLQMLVAFLPEIRNKVEEQLVGENPEDLLEAIHKLHGSCGYSGVPRLK 876

Query: 1211 QLAAEMEQSLEQQVLPSFELLQQAQSLLTQVDD 1243
             L   +EQ L     P  EL  +   LL ++D+
Sbjct: 877  NLCQLLEQQLRAGT-PESELEPEFLELLDEMDN 908