Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 921 a.a., two-component sensor histidine kinase BarA from Dickeya dianthicola ME23

 Score =  329 bits (843), Expect = 8e-94
 Identities = 224/666 (33%), Positives = 353/666 (53%), Gaps = 25/666 (3%)

Query: 580  LLDMTERKEMED-ELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLD 638
            L +  E+ E+++ EL  AK+ A   ++ K +FLANMSHE+RTP+N ++G     L T L 
Sbjct: 262  LRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQTLKTQLT 321

Query: 639  TTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQ 698
            +TQ+ Y+  I  SA NLL IIND+LDFSK+EAGKL +E I F+L + LD V  +++  A 
Sbjct: 322  STQKDYLQTIERSANNLLNIINDVLDFSKLEAGKLVLENIPFSLHNTLDEVIMLLAHTAH 381

Query: 699  EKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVT 758
            EKG+E  ++I   +P   +GDPLRL Q++ NL GNA+KFT QG I +     +    QV 
Sbjct: 382  EKGLELTLNIQHDVPEQFVGDPLRLQQIITNLLGNAIKFTEQGNIDIRIEKRRQESVQVL 441

Query: 759  LRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHS 818
            L   +KDTGIGIA+ +   LF AF QAD SI+RQ+GGTGLGL I+++LV  MGG I+ HS
Sbjct: 442  LEIQIKDTGIGIAEAQQTQLFQAFRQADTSISRQHGGTGLGLVITQRLVREMGGDISFHS 501

Query: 819  EEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNV 878
            +  +G+TF  +V   L +  + +       L  K +  V+ N +A     + L  +    
Sbjct: 502  KLNQGTTFWCTVNLQL-NPHVLEPDYHFARLQGKHLAYVEANPAA---AQATLDILVHTP 557

Query: 879  VTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREI 938
            +TVS     L ++ ++ FD+L +   +P      LL     +     + S ++ A     
Sbjct: 558  LTVSYS-PTLEQLPERTFDILLI--GIPIHYRNTLLDFTPLIRDFCRLASCVILALPSMA 614

Query: 939  NLDGENSKL--VDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLL 996
             ++ E  K   + A + KP+    LL  +  +        +          +    S++ 
Sbjct: 615  EMEAEQLKSFGIHASLSKPITAPRLLTMLQDNNLFSQDGSERALPPPAVSLSLLPLSVMA 674

Query: 997  VEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEH 1056
            V+DN  N ++   LL++   N+++   G +A+ R +    D++LMD+QMP MDG+ A+EH
Sbjct: 675  VDDNPANLKLIGALLEEQVENIILCESGADAIARAQGTHLDIILMDIQMPGMDGLQASEH 734

Query: 1057 IRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQ-VLRHFLQVSDEQ 1115
            IR  P+    PIVA+TA+ M+ + E  LQ+GM+D+LSKPI+     Q +LRH  +     
Sbjct: 735  IRQLPQHAHTPIVAVTAHTMSGEREALLQSGMDDYLSKPIDEQMLRQTLLRHACKTPS-- 792

Query: 1116 SFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDEL 1175
                   N P+   PA+     L     +D + A+ +         ++L   +D   D  
Sbjct: 793  -------NLPALPPPAVTVQSPL----SLDWDLALRQAASKPDLARDLLAMLLDFLPDVR 841

Query: 1176 NSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFELLQQAQ 1235
              V+ ++      +   + H L GS +  G+  L Q+   +EQSL ++ LP  EL  +  
Sbjct: 842  QQVSAVLAGNPPGNMVDIIHKLHGSCSYSGVPRLKQICHYLEQSL-RKGLPVDELEPEWL 900

Query: 1236 SLLTQV 1241
             L+ ++
Sbjct: 901  ELMDEM 906