Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  313 bits (801), Expect = 3e-89
 Identities = 187/521 (35%), Positives = 300/521 (57%), Gaps = 15/521 (2%)

Query: 589  MEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRI 648
            ++++   + + A   S+AK +FL++MSHE+RTPMN + GM  LA++ P    +  Y+ + 
Sbjct: 15   LKEQAESSADEARRASKAKSEFLSSMSHELRTPMNGLFGMIELAIDNP--DKRNIYLRKA 72

Query: 649  NESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDI 708
              + + LL +INDILD SK+EAGK+ +E+   +L  VLD+V ++  +    KG+EF    
Sbjct: 73   ETAGRQLLVLINDILDISKIEAGKIKIEQAPVDLLQVLDDVVSLQRVYCHRKGLEFHYLK 132

Query: 709  DPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGI 768
            DP +P  + GD  R+ Q++ NL  NA+KFT QG + L    ++       L F V DTGI
Sbjct: 133  DPDLPHVIKGDITRISQILHNLLSNAIKFTEQGSVTLKVTYTKRPNGNY-LSFDVIDTGI 191

Query: 769  GIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEF 828
            GI   KLD++F  F QAD S TR+YGGT LGLSI+KQL +LM G I V S  G+GSTF F
Sbjct: 192  GIESSKLDNIFKKFEQADQSTTREYGGTELGLSIAKQLAKLMLGDINVTSFVGQGSTFSF 251

Query: 829  SVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEAL 888
            ++    +++++ DI+  V   A+ R  +VDD  ++R   + ++T+M     +  +    L
Sbjct: 252  TMAA--EESQLPDIN--VEPSANLRCAIVDDLQTSREYFEHVVTSMSIVPQSYDSAKAYL 307

Query: 889  SEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLV 948
            S+     FD++ +D +MP M+G++LL ++K +      K  L++A    +  + + S+L+
Sbjct: 308  SD-SPLAFDVIILDLSMPEMSGVDLLEQLKAMNPDKFPKIILISAELERLEDENDVSELI 366

Query: 949  DALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVAL 1008
                 KP+N   L       + +  +      +H++ +     + +LL EDNE+N E+  
Sbjct: 367  WRTHAKPINRREL------EHDLGRLIETKPVSHNDVKEGNKKKRILLAEDNEINAEIVK 420

Query: 1009 GLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPI 1068
             +LQ  G   +   +G++A++  +   FDL+LMD  MPVM GI A+  +R      + PI
Sbjct: 421  TILQSEGYKFLHVKNGKDAVDVGKRHQFDLILMDCNMPVMGGIEASTILRKALEVDT-PI 479

Query: 1069 VAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
            VA+TANA A D E CL AGM D L+KP++ D     ++ ++
Sbjct: 480  VALTANAFAEDKEECLAAGMTDFLAKPLDKDTLLVCIKKYI 520