Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 959 a.a., Autoinducer 2 sensor kinase/phosphatase LuxQ from Alteromonas macleodii MIT1002

 Score =  246 bits (628), Expect = 7e-69
 Identities = 154/436 (35%), Positives = 246/436 (56%), Gaps = 24/436 (5%)

Query: 497 VNAKFLDLMGLYNNEVIDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQ 556
           VN+ F +L G    E+I    + +   E +++     Q+       +  E +L++Y   +
Sbjct: 468 VNSAFEELTGYSREEIIGHNCRSMQGDETSKQ--TVDQIREAIAVREPIETTLLNY---K 522

Query: 557 REMLVYEASFSDRADKVNG----IVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLA 612
           ++   +    +    K+NG     +G   D+T++++ E  L+ A+E A+  ++ K  FLA
Sbjct: 523 KDGSAFYNRLNLTPVKINGEVTHYIGFQQDVTQQRQTEQYLQDAREKAEESARLKSSFLA 582

Query: 613 NMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGK 672
           +MSHEIRTP++ I G+  L  ++ L   Q+ Y++    S + LL I+NDILDFSK+EAG+
Sbjct: 583 SMSHEIRTPIHGISGVLQLMASSELTEEQKHYLSLAKFSIQGLLHIVNDILDFSKIEAGQ 642

Query: 673 LNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCG 732
           L +E   F++ + L+N+ +  ++  QEKG+      D      + GD +R  Q++ NL G
Sbjct: 643 LQIEENPFDILESLENLQSQYAIMCQEKGLALHFHFDLQGFHVVQGDDVRFRQILSNLLG 702

Query: 733 NAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQ 792
           NAVKFT  G I ++  + Q  +  + L  +VKDTGIGIAQDK   +FD F+Q D S TR+
Sbjct: 703 NAVKFTDSGCIEVTTSIQQNADNSLRLLCSVKDTGIGIAQDKQSTIFDVFTQEDLSTTRK 762

Query: 793 YGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLA-- 850
           +GGTGLGLSISKQL ELMGG I + S +G GSTF F+++    D     + +PVH  +  
Sbjct: 763 FGGTGLGLSISKQLCELMGGDIKLESVKGHGSTFSFTIMLEQAD---EALLKPVHHSSGV 819

Query: 851 ------DKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQK--PFDMLFVD 902
                  ++VL+V+DND  + I+   L       ++  +G EAL  + +    FD++ +D
Sbjct: 820 KREKGKKRKVLIVEDNDINQVIVKQHLN--NHTTLSAKSGLEALEALNKMKVTFDVVLMD 877

Query: 903 WNMPGMNGIELLTRVK 918
             MP M+G E   R++
Sbjct: 878 CQMPEMDGFEATKRIR 893



 Score = 95.1 bits (235), Expect = 3e-23
 Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 10/138 (7%)

Query: 982  HHNS---RPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEH--ADF 1036
            HH+S   R     + +L+VEDN++NQ +    L +     + A  G EALE L      F
Sbjct: 814  HHSSGVKREKGKKRKVLIVEDNDINQVIVKQHLNNH--TTLSAKSGLEALEALNKMKVTF 871

Query: 1037 DLVLMDMQMPVMDGITATEHIR---ANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLS 1093
            D+VLMD QMP MDG  AT+ IR   A  R+ ++PI+A+TANAM  D ERC+ AGM+D+LS
Sbjct: 872  DVVLMDCQMPEMDGFEATKRIRNGEAGERYLNVPIIALTANAMKGDKERCVNAGMDDYLS 931

Query: 1094 KPIEVDKFYQVLRHFLQV 1111
            KP +       + H+  +
Sbjct: 932  KPFDAIDLIDKVEHWASI 949