Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 875 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  293 bits (750), Expect = 5e-83
 Identities = 204/681 (29%), Positives = 341/681 (50%), Gaps = 52/681 (7%)

Query: 451  IQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNN 510
            I ++ +  +Q+  E ++ E     + I D+    +Y ++ +G    +N     L+G   +
Sbjct: 25   IAIATDISEQKRLETRLSEGRAFYRSITDSIGEGVYAVNGEGTTQFLNPAASRLLGWSLD 84

Query: 511  EV----------IDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREML 560
            E+            K    + P E        +  +   QS  +YE    D  G    + 
Sbjct: 85   ELQGRRFHDTVHYQKGDGTLLPREQCP----VNLTIRSGQSYTSYEDFFTDKRGRLFPIS 140

Query: 561  VYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRT 620
            +      D+  K +G VG+  D++ +K +E +L+KA + A + ++AK DFLA MSHEIRT
Sbjct: 141  IVAVPLLDKEGKPDGHVGVFNDISGQKAIEQKLQKAYDEAQSANKAKSDFLATMSHEIRT 200

Query: 621  PMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDF 680
            PMNAI+G+ HLAL +  +  +++Y+ ++  S+  LL ++N ILDFSK+EA K+ +    F
Sbjct: 201  PMNAIIGLTHLALESTDNEQRQQYLEKVQRSSTALLDLMNSILDFSKVEADKIEIIDEPF 260

Query: 681  NLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQ 740
             L   +D +  V  +KAQ+K ++ L DI  H  L   GD  ++ QV++NL  NA+KFT+ 
Sbjct: 261  TLTKTIDKLAQVFQVKAQQKQLQLLFDIRCHTNLQCRGDSEKIYQVLLNLLSNAIKFTAS 320

Query: 741  GEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGL 800
            G ++L+     + +++  L F+V DTG+GI++     LF AF QAD SI+R+YGGTGLGL
Sbjct: 321  GHVILT-----VEKRENQLAFSVSDTGMGISEQVKSKLFKAFVQADASISREYGGTGLGL 375

Query: 801  SISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDN 860
            +I K+LVELMGG +T+ SE  KGS F F++     +        PV       VL +  +
Sbjct: 376  AICKRLVELMGGDLTLESEVDKGSCFSFALPVCSDEGPGTGPQLPVS--VPDNVLCIQTH 433

Query: 861  DSARHILDSL-LTAMRFNV-VTVSNGFEALSEIQQKPFDMLFVD----WN---------- 904
            +S     + L  T  R N+   + +  E L   +         D    WN          
Sbjct: 434  ESVSQGCEILAATLNRHNIHCQIIDQVEGLLPSKASQTIAFLPDDEQSWNSFIKHMQFGE 493

Query: 905  MPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNLLDA 964
               +N   L++ +    ++  M S LV       N++       D  ++  ++P+ L  +
Sbjct: 494  YQSLNLTTLISPLNKQDVQKRMGSALVQ------NINIIELPFTDTELISTLSPAQLSLS 547

Query: 965  IVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHG 1024
              T  G+E  + +T             + +L+V+D+ ++ E++  +L D G+NV VA+ G
Sbjct: 548  KRTIEGLESRKWRTR--------RLLNKHVLVVDDDAISVEISQQILSDLGINVAVASSG 599

Query: 1025 QEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCL 1084
            ++AL   E + FD +L+D  +P + G    E +     W++ PI+A++A+      E  L
Sbjct: 600  EQALALCEMSKFDAILLDCYLPGVSGYEVAEQLTQKKDWYT-PIIALSADESQEASESAL 658

Query: 1085 QAGMNDHLSKPIEVDKFYQVL 1105
             AGM  HL KP   D+    +
Sbjct: 659  TAGMCQHLVKPATADEIVHTI 679