Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 3e-26
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 50/374 (13%)

Query: 10  TILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYE 68
           TIL+VDD    +  + + L  Q + +  A SG  ALEI+A  PIDLV+ D  MP M G +
Sbjct: 10  TILLVDDEESILNSLRRLLRGQPFDVVLAGSGAQALEIMAAQPIDLVMSDARMPGMDGAQ 69

Query: 69  VINQIKH-NPHTEHIPVIFLTGKSNPEDEQLGFELGAVD-YVFKPVSIPLLKSRVHTHLQ 126
           ++ ++    P T  I    LTG ++          G +  Y+ KP +   L+  +   L+
Sbjct: 70  LLAEVHRLYPATSRI---LLTGYADLPTIVKAINEGQIHRYISKPWNDEELQLVLRQTLE 126

Query: 127 NKRSKDILLNQNDYL-------ETEVLRRSGELDRMQDAVVFA----------------- 162
           ++R + +   QND L       E  V  R+ EL +  D +  A                 
Sbjct: 127 HQRLERLTQVQNDQLKQLNATLEKRVAARTSELQQTADMLDLAYDELKHSYVTGTEVFSL 186

Query: 163 LASLAETRDPETGNHLLRTQHYVKVLAQRLATTDKYRDVLSPTVIDTYFKAAPLHDIGKV 222
           LA+L   ++ +T   L+     V+V     +  D     L+         AA L++IGK+
Sbjct: 187 LANLRLPKNKQTNRSLIEL---VRVYCAAQSIDDASSRDLT--------MAAALYNIGKL 235

Query: 223 GIPDNILLKPG-KLTPDEFTTMRNHALLGKLALEKAEKLSGACTALINVAKEIAMGHHEK 281
              D++L++P  KL   +    R++    +  L   E +  A          I   H E+
Sbjct: 236 SWSDSMLIEPADKLHSTDRERYRSYPTQSESLLMTLEPMKDAA--------RIIRHHQER 287

Query: 282 WDGSGYPLGLKGDDIPLSARLMALADVYDALICRRVYKEPMSHEEAKAIILQGRGSHFDP 341
           WDGSG+P  LKGD IP  +RL+ LA  +  L    + +  M+ +EA   I +  G  +DP
Sbjct: 288 WDGSGFPDHLKGDAIPFGSRLLKLAVDFIELQKGLILERQMNSDEALLYIRKYAGRLYDP 347

Query: 342 MVIDAFLIEEQNFI 355
            +++ F++    F+
Sbjct: 348 ELVEDFVLACATFL 361