Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score =  271 bits (694), Expect = 1e-77
 Identities = 148/362 (40%), Positives = 220/362 (60%), Gaps = 36/362 (9%)

Query: 6   LSQCTILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMS 65
           +++ T+L+VDD P N+  + Q LA  Y++  AR+G+ AL++      +L+LLD++MP ++
Sbjct: 6   ITKPTLLLVDDEPVNLRVLKQVLANDYQLIFARNGEEALKLTETRQPNLILLDVMMPGLT 65

Query: 66  GYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHL 125
           G+EV  Q+K    T HIPVIF+T  ++  +E  GFE GAVDY+ KP+S  ++++RV THL
Sbjct: 66  GFEVCRQLKQQADTRHIPVIFVTALNDEHEETEGFEAGAVDYITKPISPVIVRARVKTHL 125

Query: 126 QNKRSKDILLNQNDYLETEVLRRSGELDRMQDAVVFALASLAETRDPETGNHLLRTQHYV 185
                   L+  ++ L++          R+Q  VV  L   AE +D ETG H++R  HY 
Sbjct: 126 S-------LVQADELLDS----------RLQ--VVQRLGRAAEYKDNETGMHVMRMSHYS 166

Query: 186 KVLAQRLATTDKYRDVLSPTVIDTYFKAAPLHDIGKVGIPDNILLKPGKLTPDEFTTMRN 245
           K LA     TDK  ++L          AAP+HDIGK+GI D+I+LKPGKLT +EF TM+N
Sbjct: 167 KELALAYGLTDKQAEIL--------LHAAPMHDIGKIGIADSIMLKPGKLTDEEFATMKN 218

Query: 246 HALLGKLALEKAEKLSGAC--TALINVAKEIAMGHHEKWDGSGYPLGLKGDDIPLSARLM 303
           H  +G        ++ G C  + L+ VAK +++ HHEKWDGSGYP GL G+DIP+  R+ 
Sbjct: 219 HPEIG-------AEIIGDCGDSLLLKVAKSVSLTHHEKWDGSGYPKGLAGEDIPIEGRIC 271

Query: 304 ALADVYDALICRRVYKEPMSHEEAKAIILQGRGSHFDPMVIDAFLIEEQNFIDIAQKFAD 363
           A+ADV+DAL  +R YK+  S E+    +   +G HF+P ++D  +      +DI   F D
Sbjct: 272 AIADVFDALTSKRPYKDAWSIEKTVDFLQSQKGKHFEPRLVDLMIEIMPKILDIKATFKD 331

Query: 364 EE 365
           E+
Sbjct: 332 ED 333