Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score =  256 bits (654), Expect = 7e-73
 Identities = 143/347 (41%), Positives = 208/347 (59%), Gaps = 21/347 (6%)

Query: 10  TILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYEV 69
           +IL+VDD P NI  +   L  YY +K A SG +AL+I  Q+  DL+LLDI+MP M G+EV
Sbjct: 12  SILVVDDEPANIDILLGILGPYYDVKVAPSGTIALKITQQFTPDLILLDIMMPGMDGFEV 71

Query: 70  INQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHLQNKR 129
             ++K N    HIPVIF+T  +  EDE+ GF+LGAVDY+ KPVS  +  +RV TH+    
Sbjct: 72  CKKLKANEALSHIPVIFVTALTQGEDEEKGFKLGAVDYITKPVSPSITLARVKTHIS--- 128

Query: 130 SKDILLNQNDYLETEVLRRSGELDRMQDAVVFALASLAETRDPETGNHLLRTQHYVKVLA 189
               L +Q    E  V  R+ EL + Q + +  LA+     D +TG+H+ R   Y + LA
Sbjct: 129 ----LAHQMRTAENLVAARTKELSKSQQSAISMLAAAGHYNDTDTGHHIWRMAAYSQCLA 184

Query: 190 QRLATTDKYRDVLSPTVIDTYFKAAPLHDIGKVGIPDNILLKPGKLTPDEFTTMRNHALL 249
                  +   +L+        +AAP+HD GK+GI D IL  P +L+  E   MR+HA +
Sbjct: 185 LAHGWPFEKACLLA--------QAAPMHDTGKIGIADAILKAPRRLSLSEMEVMRSHAEI 236

Query: 250 GKLALEKAEKLSGACTALINVAKEIAMGHHEKWDGSGYPLGLKGDDIPLSARLMALADVY 309
           G   L + +      T L N+A EIA+ HHEKWDG+GYP GL+ + IP SAR++A+ADV+
Sbjct: 237 GHRILSQCD------TPLFNLAAEIALCHHEKWDGTGYPRGLREEAIPESARIVAIADVF 290

Query: 310 DALICRRVYKEPMSHEEAKAIILQGRGSHFDPMVIDAFLIEEQNFID 356
           DAL  +R YK+  + ++A   + +G G HFDP+++D FL  ++  ++
Sbjct: 291 DALTMKRPYKKAWADDDAFDHLKRGSGQHFDPVLVDCFLSIKEEVLE 337