Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 11  ILIVDDSPDNIAFMSQGL-AQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYEV 69
           +L+VDD P N+  +   L A+Y+ +  A  G  AL I  +  +D++LLDI+MP M G+EV
Sbjct: 5   VLVVDDIPANVKLLEARLVAEYFDVVTAEDGFKALAICDEEQVDIILLDIMMPGMDGFEV 64

Query: 70  INQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHLQNKR 129
             ++K NP+T HIPV+ +T    P D   G + GA D++ KPV+   L +RV + ++ K 
Sbjct: 65  CERLKANPNTAHIPVVMVTALDQPSDRVRGLKAGADDFLTKPVNDLQLIARVKSLVRLKA 124

Query: 130 SKDIL 134
             D L
Sbjct: 125 VSDEL 129



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 1/137 (0%)

Query: 11  ILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYEVI 70
           +L+ D    +   + + L     + A    + AL   A  P +LV+++    +     + 
Sbjct: 157 VLVADGRASSQERIIRALKPVAEVDAVTEPQAALLKAASSPFELVIVNSNFEDYDPLRLC 216

Query: 71  NQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHLQNKR- 129
           +Q +    T  +P++ +  +   E      +LG  DY+ +P+    L +R  T ++ KR 
Sbjct: 217 SQFRSLERTRFLPLLLVAEQGADEMVARALDLGVNDYILRPIDPNELVARSLTQIRRKRY 276

Query: 130 SKDILLNQNDYLETEVL 146
           ++ + LN    +E  ++
Sbjct: 277 NEHLRLNLQHTMELAIV 293