Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase from Rhodanobacter sp000427505 FW510-R12

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 78/368 (21%), Positives = 143/368 (38%), Gaps = 39/368 (10%)

Query: 16  LIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYARLEGTLNDSILFSC 75
           LI+  S + ++      + E+L    F V  L       +  NL+A   GT + +++F  
Sbjct: 11  LIRRRSVTPDDAGCLPLIGERLAHASFVVEHL----RYGDVDNLWAT-HGTGDPTLIFLG 65

Query: 76  HMDTVKPGIG-------IEPVIEDGIIRSKGNTILGGDDKSGIAAILEAVRVLRDSQQAH 128
           H D V  G          EPV+ DG +  +G      D K  +AA++ A+     +   H
Sbjct: 66  HTDVVPSGPEAAWQSPPFEPVVRDGRLYGRG----AADMKGSVAAMVVALEQFVATHPDH 121

Query: 129 K-TIEIAFTVHEEGGL------KGSEHFDMSKVQAEKAIVLDTGGP--IGTIVRAAP-GQ 178
           +  + +  T  EEG        K +E F  +  + +  +V +      +G ++R    G 
Sbjct: 122 RGRVGLLLTSDEEGPTNLDGVRKVAERFRATGERIDWCVVGEPSARERLGDLIRVGRRGS 181

Query: 179 QKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE------ETTANIGIVQGG 232
                 ++G   H    PE  ++ I   A A+ ++   R D        T+  +  +  G
Sbjct: 182 LSGTLSVRGVQGHVAY-PEKALNPIHAFAPALAELAATRWDNGNADFPPTSFQVSNLNAG 240

Query: 233 QATNIVMP-ELKIVAEARSLNDAKLEAQVQHMIETFERAAEKHGATVEIESTRAYNAFKL 291
              N V+P EL  +   R    ++ +     +    E   ++HG    ++   +   F  
Sbjct: 241 TGANNVIPGELVALVNFRYCTASRAD----DLRARAEAILQRHGLDFTLDWNLSGEPFLT 296

Query: 292 EEDNAHIQAIKASFETI-GIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVHTTEEYI 350
                  + + A    + GI+P+    GG SD       G   V L    A +H  +E +
Sbjct: 297 PPGGILRETVVAVCRDLCGIDPEQSTGGGTSDGRFIALLGAEVVELGPVNATIHKVDECV 356

Query: 351 AIADMVKI 358
            +A++ K+
Sbjct: 357 DVAELEKL 364