Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., succinyl-diaminopimelate desuccinylase from Pseudomonas simiae WCS417

 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 89/372 (23%), Positives = 153/372 (41%), Gaps = 39/372 (10%)

Query: 14  LQLIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYARLEGTLNDSILF 73
           + LI+  S +  +    + + ++LG+ GF +  + +  +V N +  + + +G +   + F
Sbjct: 15  IDLIRRPSVTPIDADCQKLMMQRLGDAGFALEPMRIE-DVDNFWATHGKHDGPV---LCF 70

Query: 74  SCHMDTVKPGI-------GIEPVI-EDGIIRSKGNTILGGDDKSGIAAILEAVRVLRDSQ 125
           + H D V  G          + +I E+G++  +G      D K  +AA+L A        
Sbjct: 71  AGHTDVVPTGPVQAWQNDPFDALIDENGMLCGRG----AADMKGSLAAMLVAAERFVTDY 126

Query: 126 QAHK-TIEIAFTVHEEG----GLKGS-EHFDMSKVQAEKAIVLDTGGP--IGTIVR-AAP 176
             HK ++    T  EEG    G K   E     K + +  IV +      +G +V+    
Sbjct: 127 PDHKGSVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDVVKNGRR 186

Query: 177 GQQKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE------ETTANIGIVQ 230
           G       ++G   H    P    + I +AA A+ ++     D+       T+  I  + 
Sbjct: 187 GSLGATLTVRGIQGHVAY-PHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQISNLN 245

Query: 231 GGQ-ATNIVMPELKIVAEARSLNDAKLEAQVQHMIETFERAAEKHGATVEIESTRAYNAF 289
            G  ATN++  +LK V   R   ++ +E   Q + E      +KHG    +E   +   F
Sbjct: 246 SGTGATNVIPGDLKAVFNFRFSTESTVEGLQQRVAEIL----DKHGLDWHVEWALSGLPF 301

Query: 290 KLEEDNAHIQAIKASFETI-GIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVHTTEE 348
            L E  A + A+ AS + I G E +   SGG SD       G   V L    A +H   E
Sbjct: 302 -LTEPGALLDAVSASIKAITGRETQASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE 360

Query: 349 YIAIADMVKIAE 360
            I  +D+  + E
Sbjct: 361 RILASDLDVLTE 372