Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 94/385 (24%), Positives = 156/385 (40%), Gaps = 49/385 (12%)

Query: 3   LINTQRLVDHFLQLIQIDSESGNEKKIAETLAEQLGELGF---TVHKLPVPAEVSNGFNL 59
           + +T RL +    LI   S +  ++     +  +L  LGF   T+   P    V+N   L
Sbjct: 1   MTDTLRLTE---ALIACPSVTPRDEGCQAMIGARLARLGFACETIESGPADFRVTN---L 54

Query: 60  YARLEGTLNDSILFSCHMDTVKPGI-------GIEPVIEDGIIRSKGNTILGGDDKSGIA 112
           +ARL      +++F+ H D V  G           P   DG +  +G      D K+ +A
Sbjct: 55  WARLGQGRRPTLVFAGHTDVVPTGPLTAWTSDPFVPSHRDGKLFGRGTA----DMKTSLA 110

Query: 113 AILEAVRVLRDSQQAHKTIEIAF--TVHEEG-GLKGS-----------EHFDMSKVQAEK 158
           A++ A      +  A   I++AF  T  EEG  L G+           E  D   V  E 
Sbjct: 111 AMVVACEEFVAANPA-PAIDVAFLLTSDEEGPALDGTVVVCDALRQRGERLDWCIV-GEP 168

Query: 159 AIVLDTGGPIGTIVRAAPGQQKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRI 218
             V  TG  I    R     +  V  I+G  A+  L      + I +AA A+ ++     
Sbjct: 169 TSVERTGDMIKNGRRGTMSGKLTVKGIQGHIAYPHLAK----NPIHLAAPALAELTATVW 224

Query: 219 DE------ETTANIGIVQGGQ-ATNIVMPELKIVAEARSLNDAKLEAQVQHMIETFERAA 271
           DE       T+  I  + GG  A+N++   + I    R   ++  E   Q + E  +R  
Sbjct: 225 DEGNAFFPPTSWQISNIHGGTGASNVIPGTVVIDFNFRFSTESTPEGLQQRVAELLQRHG 284

Query: 272 EKHGATVEIESTRAYNAFKLEEDNAHIQAIKASFET-IGIEPKTKLSGGGSDANNFNAKG 330
            + GA  +++ T     F L +    + A++A+    +GI+     +GG SD        
Sbjct: 285 LQPGADFDLDWTLGGRPF-LTQPGTLVDAVRAAVHAEVGIDTTLSTTGGTSDGRFIAQVC 343

Query: 331 LTTVNLSTGMAKVHTTEEYIAIADM 355
              + L    A +H  +E++A+AD+
Sbjct: 344 PQVIELGPPNATIHKIDEHVAVADI 368