Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase from Pectobacterium carotovorum WPP14

 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 85/370 (22%), Positives = 149/370 (40%), Gaps = 50/370 (13%)

Query: 15  QLIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYARLEGTLNDSILFS 74
           QLI+  S S N++     + E+L  +GFTV  +    +  +  N +A   GT   ++ F+
Sbjct: 11  QLIKRPSLSPNDEGCQALMIERLTAIGFTVEAM----DFGDTQNFWA-WRGT-GKTLAFA 64

Query: 75  CHMDTVKPGIG-------IEPVIEDGIIRSKGNTILGGDDKSGIAAILEAVRVLRDSQQA 127
            H D V  G          EP+I DG++  +G      D K  +AA++ A      +   
Sbjct: 65  GHTDVVPSGDESHWQHPPFEPIIRDGMLYGRG----AADMKGSLAAMVIAAERFVAAHPN 120

Query: 128 HK-TIEIAFTVHEE-----GGLKGSEHFDMSKVQAEKAIVLDTGGP--IGTIVR-AAPGQ 178
           H+  +    T  EE     G +K  E       + +  +V +      +G +V+    G 
Sbjct: 121 HQGRLAFLITSDEEASAVNGTVKVVEALMARNERLDYCLVGEPSSTHVVGDVVKNGRRGS 180

Query: 179 QKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE------ETTANIGIVQGG 232
                 + G   H    P    + +  AA A+ ++     D+       TT  I  +Q G
Sbjct: 181 ITANLRVHGVQGHVAY-PHLADNPVHRAAPALNELIATEWDQGNDFFPPTTMQIANIQAG 239

Query: 233 QATNIVMP-ELKIVAEAR---SLNDAKLEAQVQHMIETFERAAEKHGATVEIE---STRA 285
             +N V+P EL +    R    L D  ++ +V  +++       +H     I+   S + 
Sbjct: 240 TGSNNVIPGELFVQFNFRFSTELTDVLIQQRVAELLD-------RHQLNYTIDWKLSGQP 292

Query: 286 YNAFKLEEDNAHIQAIKASFETIGIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVHT 345
           +   + E  +A + A+K   E   + P+   +GG SD       G   V L    A +H 
Sbjct: 293 FLTARGELVDAVVNAVKHYNE---VTPELLTTGGTSDGRFIARMGAQVVELGPVNATIHK 349

Query: 346 TEEYIAIADM 355
            +E ++ AD+
Sbjct: 350 VDECVSAADL 359