Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 93/365 (25%), Positives = 148/365 (40%), Gaps = 31/365 (8%)

Query: 16  LIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYARLEGTLNDSILFSC 75
           LI+  S +  +    + LA  L ELGF  H +          NLYARL GT   ++ F+ 
Sbjct: 13  LIRCPSVTPEDAGALDVLAGALEELGFACHHIRSATGGPEIRNLYARL-GTEAPNLCFAG 71

Query: 76  HMDTVKPGIG--IEPV---IEDGIIRSKGNTILGGDDKSGIAAILEAVRVLRDSQQAHKT 130
           H D V PG G  +EP    I+ G +  +G+     D K  IA  + AV  L +      +
Sbjct: 72  HTDVVPPGKGWTVEPFAAGIDQGRLFGRGSA----DMKGAIACFVAAVARLLEDGAPKGS 127

Query: 131 IEIAFTVHEEG-GLKGS-EHFDMSKVQAEKAIVLDTGGP-----IGTIVRAAP-GQQKIV 182
           + +  T  EEG  + G+ +  D    + E+      G P     +G +++    G     
Sbjct: 128 LSLLITGDEEGPAVDGTVKVLDWLAARGERIDCCIVGEPTNPRKLGDMMKIGRRGSLNCR 187

Query: 183 ALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE-------ETTANIGIVQGGQAT 235
             + G   H+   P    + I    D + ++    +DE        T A   +  G  AT
Sbjct: 188 LTVFGTQGHSAY-PHLADNPIPRLLDILRRLTEAPLDEGTPHFQASTLALTTVDVGNPAT 246

Query: 236 NIVMPELKIVAEARSLNDAKLEAQVQHMIETFERAAEKHGATVEIESTRAYNAFKLEEDN 295
           N++  E +     R  ND    A ++  I      A   G  VEI+   +  +F      
Sbjct: 247 NVIPAEARAGFNIR-FNDLHSGASLERWIRDTVAQA---GGEVEIKVEVSGESFLTPPGA 302

Query: 296 AHIQAIKASFETIGIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVHTTEEYIAIADM 355
                 +A+FE  G+ P+   SGG SDA  F       V        +H ++E++++ADM
Sbjct: 303 LSDALAEAAFEVTGLRPELSTSGGTSDA-RFIKNHCPVVEFGLVGQTMHKSDEHVSVADM 361

Query: 356 VKIAE 360
             + E
Sbjct: 362 EALTE 366