Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Escherichia coli BW25113

 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 89/375 (23%), Positives = 149/375 (39%), Gaps = 52/375 (13%)

Query: 15  QLIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYA-RLEGTLNDSILF 73
           QLI+  S S ++      L E+L  +GFTV ++    + ++  N +A R +G   +++ F
Sbjct: 11  QLIRRPSLSPDDAGCQALLIERLQAIGFTVERM----DFADTQNFWAWRGQG---ETLAF 63

Query: 74  SCHMDTVKPGIG-------IEPVIEDGIIRSKGNTILGGDDKSGIAAILEAVRVLRDSQQ 126
           + H D V PG          EP I DG++  +G      D K  +AA++ A      +Q 
Sbjct: 64  AGHTDVVPPGDADRWINPPFEPTIRDGMLFGRG----AADMKGSLAAMVVAAERFV-AQH 118

Query: 127 AHKTIEIAFTVHEEGGLKGSEHFDMSKV------QAEKAIVLDTGGP-----IGTIVR-A 174
            + T  +AF +  +   + S H    KV      + E+      G P     +G +V+  
Sbjct: 119 PNHTGRLAFLITSDE--EASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNG 176

Query: 175 APGQQKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE------ETTANIGI 228
             G       I G   H    P    + +  AA  + ++  +  D+       T+  I  
Sbjct: 177 RRGSLTCNLTIHGVQGHVAY-PHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIAN 235

Query: 229 VQGGQATNIVMP-ELKIVAEAR---SLNDAKLEAQVQHMIETFERAAEKHGATVEIESTR 284
           +Q G  +N V+P EL +    R    L D  ++AQV  ++E       KH     ++   
Sbjct: 236 IQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE-------KHQLRYTVDWWL 288

Query: 285 AYNAFKLEEDNAHIQAIKASFETIGIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVH 344
           +   F           + A      I+P+   +GG SD       G   V L    A +H
Sbjct: 289 SGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIH 348

Query: 345 TTEEYIAIADMVKIA 359
              E +  AD+  +A
Sbjct: 349 KINECVNAADLQLLA 363