Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., 3-methylitaconate isomerase from Pseudomonas simiae WCS417

 Score =  580 bits (1494), Expect = e-170
 Identities = 288/391 (73%), Positives = 333/391 (85%), Gaps = 4/391 (1%)

Query: 5   VPQIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGG 64
           V QI+IPATYMRGGTSKGVFF L DLP  AQ+PGAARDALLLRVIGSPDPY KQIDGMGG
Sbjct: 4   VAQIKIPATYMRGGTSKGVFFSLQDLPESAQVPGAARDALLLRVIGSPDPYDKQIDGMGG 63

Query: 65  ATSSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPA 124
           ATSSTSKTVI++ S+R DHDVDYLFGQV+IDKPFVDWSGNCGNLSAAVG FAI AGL+  
Sbjct: 64  ATSSTSKTVILAKSTRADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISAGLVDP 123

Query: 125 ECIPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPAD 184
             +PHNGV  V+VWQ NI KTI+ HVPI +GAVQE G+FELDGVTF AAEVQ++F+DPA 
Sbjct: 124 ARVPHNGVAVVRVWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQLEFMDPAA 183

Query: 185 DS----GAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSD 240
           +     G+MFPTGN++DDL+VPG+GT  AT IN+GIPTIF++AE LGY GTELQ AINSD
Sbjct: 184 EEEGGGGSMFPTGNLIDDLEVPGVGTFKATLINAGIPTIFINAEDLGYTGTELQGAINSD 243

Query: 241 PQALAKFETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDL 300
           P+ALA FET+RAYGAL+MGLI+ ++EA  RQHTPK+AFV+    Y+ASSGK + A  VDL
Sbjct: 244 PKALAMFETVRAYGALRMGLIKHLDEAAQRQHTPKVAFVAKPADYVASSGKAINAGDVDL 303

Query: 301 LVRALSMGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGAKA 360
           LVRALSMGKLHHAMMGTAAVAI +AAA+ GTLVNLAAGG ER +V FGHPSGTL+VGA+A
Sbjct: 304 LVRALSMGKLHHAMMGTAAVAIGTAAAISGTLVNLAAGGVERNAVRFGHPSGTLRVGAEA 363

Query: 361 KQGKQGWQIERAIMSRSARILMEGWVRVPAN 391
            Q    W +++AIMSRSAR+LMEG+VRVP +
Sbjct: 364 TQVNGEWVVKKAIMSRSARVLMEGFVRVPGD 394