Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Uncharacterized protein Bsu YraM from Variovorax sp. SCN45

 Score =  210 bits (534), Expect = 7e-59
 Identities = 135/393 (34%), Positives = 204/393 (51%), Gaps = 16/393 (4%)

Query: 2   NETVPQIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDG 61
           N    QI +    MRGGTSK +FF   D+P      G ARD LL R +G+PD    QIDG
Sbjct: 4   NPDTEQIAVRCVLMRGGTSKALFFHERDVPPA----GPARDRLLKRAMGTPDVL--QIDG 57

Query: 62  MGGATSSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGL 121
           MGG+   TSK  I+  S+R D DVDY F QV +D+  V    NCGN+S+AV PFAI  GL
Sbjct: 58  MGGSRLVTSKVAIIQRSAREDADVDYTFAQVDVDRDIVGHDANCGNISSAVAPFAIDEGL 117

Query: 122 IPAECIPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVD 181
           + A       V  V+++  N  K +V  V + NG  +  G+  + GV    AE+ +D+  
Sbjct: 118 VEAT----EPVTTVRIYNTNTDKLLVSKVQVRNGKARVHGDCAIPGVPGTGAEILMDYAG 173

Query: 182 PAD-DSGAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSD 240
                +G + PTG  +D + +     +  +  ++  P +F+ A++LG  G+EL +AI++D
Sbjct: 174 TVGAKTGRLLPTGRTVDTVTLEDGRHIEVSLCDTANPCVFIAAQSLGMSGSELPDAISAD 233

Query: 241 PQALAKFETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDL 300
              +     +++    ++GL     +  +    P    V+    Y   +G R EA S+DL
Sbjct: 234 RALIETLGEIQSKMGQRIGLYADWRDV-HLPGLPLAVIVAPPAGYADVNGDRQEAASMDL 292

Query: 301 LVRALSMGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVT--FGHPSGTLKVGA 358
             R + +GK H +M GT ++  A+A+ VPG+ V+ A G     + T   GHP G ++V  
Sbjct: 293 RARLVFLGKCHDSMAGTGSMCTAAASRVPGSTVHQAIGAERAATGTLRIGHPLGVMEVKV 352

Query: 359 KAKQGKQGWQIERAI--MSRSARILMEGWVRVP 389
            A+       I  +   ++R+AR LM G V VP
Sbjct: 353 VAEPSAAPADIRFSALGLTRTARRLMAGEVYVP 385