Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  164 bits (414), Expect = 5e-45
 Identities = 125/382 (32%), Positives = 184/382 (48%), Gaps = 35/382 (9%)

Query: 9   RIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGATSS 68
           +IP   MRGGTS+G F     LP +       RD +L+ ++GS +    +IDG+GG    
Sbjct: 3   KIPCVMMRGGTSRGAFLLAEHLPEDQ----TQRDKILMAIMGSGNDL--EIDGIGGGNPL 56

Query: 69  TSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAECIP 128
           TSK  I+S SS    DVDYLF QV + +  VD + NCGN+ + VG FAI  GLI A    
Sbjct: 57  TSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAAT--- 113

Query: 129 HNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPA-DDSG 187
            + V  V++  VN    I   V   NG V+  G   +DGV   AA V + F++ A   +G
Sbjct: 114 -SPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTG 172

Query: 188 AMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDPQALAKF 247
            +FPT N     Q+     +  T I+  +P + + AE LG  G EL   +++D   LA+ 
Sbjct: 173 KVFPTDN-----QIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARI 227

Query: 248 ETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLLVRALSM 307
           E++R      MGL +      +    PK   +S A+   A            + VR    
Sbjct: 228 ESIRLQAGKAMGLGD-----VSNMVIPKPVLISPAQKGGA------------INVRYFMP 270

Query: 308 GKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGAKAKQGKQGW 367
              H A+  T A+AI+S+ A+ GT+           ++   HPSG L V   + +G+   
Sbjct: 271 HSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHL-SNEGQDAT 329

Query: 368 QIERAIMSRSARILMEGWVRVP 389
            + RA + R+ R +  G V +P
Sbjct: 330 TL-RASVIRTTRKIFSGEVYLP 350