Pairwise Alignments

Query, 377 a.a., 2-methylcitrate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 16/201 (7%)

Query: 164 MLTGQAPSELFKKVMHCSLTLYAEHEFNASTFA-ARVCASTLSDIHSCVTGAIGTLRGPL 222
           ML G+ P+    +++  +L    +H   A + A AR+ A+    +++ +   I  L G +
Sbjct: 53  MLRGELPTPAQGRLLGAALVAAVDHGPQAPSIATARMAATCGVGLNNAMASGINAL-GDV 111

Query: 223 HGGANE------AAMAMIEQWHSAD------EAEAGIMRMLASKEKIMGFGHAIYRESDP 270
           HGGA +      AA+A     H A        A+  I   L  +E I GFGH  +     
Sbjct: 112 HGGAGQQCMELYAAVAARMANHGAGGMSVAGAADEEIAARLERREHIPGFGHRFHPVDPR 171

Query: 271 RNALIKEWSKALSEAVGDSHLYAVSERVEAVMKREKD--LFCNADFFHASAYHFMGIPTK 328
              L+     A  E        A+   VE  +   K   L  N D   A  +  +G P+ 
Sbjct: 172 AGRLLALVEAATGEGAVTGEAAAIGRAVEDALAARKGRRLPMNIDGATAVVFAELGFPSG 231

Query: 329 LFTPIFVMSRLTGWAAHVYEQ 349
           L   +FV+SR  G  AH +EQ
Sbjct: 232 LGRGLFVLSRSVGIMAHAWEQ 252



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 35 RGYDITDLAHHAQFEEVAHLLLVGYLPTQAE 65
          RGY I +L     F ++  L+L G LPT A+
Sbjct: 33 RGYAIEELIGTIGFPDMVWLMLRGELPTPAQ 63