Pairwise Alignments

Query, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 15/227 (6%)

Query: 3   KSSP--LVRQASTEKESTKSENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLRE 60
           K SP  L   A+ E     SE   + ++  ++ G+LAP   ++E ++A Q  +SR PLRE
Sbjct: 4   KPSPAELDADAALEPSLALSEVAHKAMMGMLLSGELAPNEVVTERQIALQLGISRTPLRE 63

Query: 61  ALMRVEGLGLIERIPHIGARVIQLSP-TKLVELYAVREALEGMAARLAARNITEIELAGL 119
           A+ R+EG   +ER    GA V++  P  + + +  VR  +EG AARLAA  +   EL  L
Sbjct: 64  AVRRLEGERFLER-QRNGALVVRALPIEEYMHILNVRRLVEGEAARLAAGRVAAAELELL 122

Query: 120 ESLLSTHSTHIDQVEGASYFHQQGDFDFHYRIIQACRN---QQLIGLLCDELYHLLRMYR 176
           +S +       + V    +     D D H  I  AC N   QQ+IG L       +R   
Sbjct: 123 KSRIGEALQLPEDVVTPEF--AASDRDLHALIAAACGNPVLQQVIGDL------RMRTAM 174

Query: 177 YQSPRSHSRPVEALEEHKFILRAIRQRDEELAEMLMRRHISRSRQLI 223
           ++  R   R     EEH  I+ A+   D + A+  M  H+ + R +I
Sbjct: 175 FRFGRLPQRRKTVCEEHLEIIDALMAGDAQRAQKAMHHHVDQVRLMI 221