Pairwise Alignments

Query, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., HTH-type transcriptional repressor NanR from Azospirillum sp. SherDot2

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 3/199 (1%)

Query: 18  TKSENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLREALMRVEGLGLIERIPHI 77
           T ++ +   L   IV  +  PG  I+E ++A+ + VSR P+REA++R+   GLIE  P  
Sbjct: 50  TAADAIHRDLRAEIVSLKRKPGEPIAEKQIAEAYGVSRTPVREAVLRLADEGLIEIFPQS 109

Query: 78  GARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAGLESLLSTHSTHIDQVEGAS 137
           G  V ++    L E   +R+ LE    R AA   +  ++A L + L  H   +D V  A 
Sbjct: 110 GTFVARIPLGALPEAGVIRKVLERATVRFAAERASRSQIAALRACLE-HQREVDAVGDAD 168

Query: 138 YFHQQGDFDFHYRIIQACRNQQLIGLLCDELYHLLRMYRYQSPRSHSRPVEALEEHKFIL 197
            FH Q D  FH +I +        G++      L R  R   P    R    + EH+ I+
Sbjct: 169 GFH-QADEAFHAQITEMAGYPGFWGIIQQAKVQLDRCRRLTLP-VPGRMRTVIAEHEAIV 226

Query: 198 RAIRQRDEELAEMLMRRHI 216
            AI   D + AE  + RH+
Sbjct: 227 EAIAGHDPDRAEQSLVRHL 245