Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  121 bits (304), Expect = 2e-32
 Identities = 92/324 (28%), Positives = 152/324 (46%), Gaps = 13/324 (4%)

Query: 9   LTAAMLAATFSFSSLAADL-------EKIHFIVPGGAGGGWDMTARATGDALMKAKLVGN 61
           L A +  A  SF++L+ +          I  IVP  AGGG D  AR    +L++  L   
Sbjct: 5   LMAGLALAVSSFAALSPNAATAAYPDRPITLIVPWNAGGGTDAVARIVA-SLLEKDLGQP 63

Query: 62  ASYQNLSGGGGGKAIAH-LIETADRQQDTLMINSTPIVIRSLSGVFPQSFRDLTPVAEIV 120
            +  N +GG G   + H  I  A     T+ I +  I +    G+   +    TP+A + 
Sbjct: 64  IAVVNRTGGQG--VVGHQAIADATPDGYTIGIITVEIGMMHWQGLTQLTGASYTPLALMN 121

Query: 121 SDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKE 180
            D     V  D+ Y + + ++AD KANP + K A G+ +G + HL  A       LDPK 
Sbjct: 122 EDPAGVQVRADAAYKTLDDLIADIKANPGKFK-ASGTGQGGIWHLALAGMLSSLKLDPKS 180

Query: 181 VRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTL 240
           V +V  +     +  L++G  QV++  + E   +  + +V+ LAI + +R  + PDIPTL
Sbjct: 181 VPWVPSNGAAPGLQDLVAGGVQVVTCSIPEARSLIDAKRVKSLAIMASERSKLMPDIPTL 240

Query: 241 AD-YGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKGDK 299
            +  G+  T   WRG+ A  G+      +     KK++ S+E++      G+   Y    
Sbjct: 241 KEATGSSWTIGAWRGFAAPKGLDKAASDKLQAALKKVYDSKEYQDFLTNRGFGGRYADGP 300

Query: 300 EFYAFLEEQEKQMGDLMRELGFLK 323
            F  F+ + +  +G +M+E+G  K
Sbjct: 301 GFAEFMAKADASLGAVMKEVGLAK 324