Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., tricarboxylic transport membrane protein from Pseudomonas simiae WCS417

 Score =  143 bits (361), Expect = 5e-39
 Identities = 105/326 (32%), Positives = 156/326 (47%), Gaps = 10/326 (3%)

Query: 7   PSLTAAMLAA---TFSFSSLAADLEKI-HFIVPGGAGGGWDMTARATGDALMKAKLVGNA 62
           PSL    LAA    F+   LAAD  K    I P   GGG+D+T +    AL+  KL+   
Sbjct: 3   PSLRKLALAAGCMLFAGQLLAADEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLSKP 62

Query: 63  SYQNLSGGGGGKAIAHLIETADRQQD--TLMINSTPIVIRSLSGVFPQSFRDLTP-VAEI 119
                  GG G A+A+    A R  D  TL+  S+  ++    G F +        +A +
Sbjct: 63  MRVTYMPGGVG-AVAYNAVVAQRPADAGTLVAWSSGSLLNLAQGKFGRFDESAVRWLAAV 121

Query: 120 VSDYGAFVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPK 179
            + YGA  V  DS Y + + +V   K +P  + I  G   GS D +  A   K  G++P+
Sbjct: 122 GTSYGAIAVKADSPYKTLDDLVKALKKDPGSVVIGSGGTVGSQDWMQTALIAKAAGINPR 181

Query: 180 EVRYVAYDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLD--IAPDI 237
           E+RYVA + GG   TALL G  QV ST + + +    SG +R+LA+ S +RLD     DI
Sbjct: 182 ELRYVALEGGGEIATALLGGHIQVGSTDISDSMPHILSGDMRLLAVFSEQRLDEPEMKDI 241

Query: 238 PTLADYGNPTTFVNWRGYFAAPGVSAEKVAEWNEVFKKMFASEEWKVIRDRNGWIDSYKG 297
           PT  + G    +   RG++  P VS    A W + F K+ AS+E+  +RD+         
Sbjct: 242 PTAKEQGYDIVWPVVRGFYLGPKVSDADYAWWKDAFDKLLASDEFAKLRDQRELFPFAMT 301

Query: 298 DKEFYAFLEEQEKQMGDLMRELGFLK 323
             E   ++++Q      L +E G ++
Sbjct: 302 GPELDTYVKKQVADYKVLAKEFGLIQ 327