Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 17/277 (6%)

Query: 12  AMLAATFSFSSLAADLEKIHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGGG 71
           A +AAT +  +     + +H +VP  AGG  D   R     L + +       +NL+G  
Sbjct: 31  APVAATAADEAAGFPTKPVHIVVPVAAGGSADKLTRLIAQGLTE-RWGQPVVVENLAGAS 89

Query: 72  GGKAIAHLIET-AD-----RQQDTLMINSTPIVIRSLSGVFPQSFRDLTPVAEIVSDYGA 125
           G    A + ++ AD     +Q + L +NS  I+   L     ++F    PV + V +   
Sbjct: 90  GTIGAARVAKSPADGYTLLQQGEGLTLNS--ILFERLPYDSQKAF---APVIKAVVNPQI 144

Query: 126 FVVAGDSKYTSWEQVVADFKANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVA 185
            VV   +  T +   +A  KA P+ I + G    G + H+      +  G     V Y+ 
Sbjct: 145 LVVNPQTGITDFRTYLARAKAKPQSISL-GLPGNGGIAHVAHEMISQDTGA---LVNYIP 200

Query: 186 YDAGGSAMTALLSGETQVLSTGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGN 245
           Y  GG A   +L+G        L  V +  ++G++R LA+T+P R    PD+PT+A+ G 
Sbjct: 201 YSGGGPATLDVLAGHVDATLITLAAVTDHVRAGKLRALAVTTPYRSAALPDVPTMAEAGL 260

Query: 246 PTTFV-NWRGYFAAPGVSAEKVAEWNEVFKKMFASEE 281
           P   V +W+GYFA  G  A  V + N     + A+ E
Sbjct: 261 PGFSVESWQGYFAPAGTPAAVVTKINRDINAVIAAPE 297