Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 30  IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGGGGGKAIAHLIETADRQQDT 89
           I  IVP  AGG  D+ ARA  D L ++  +G         G G    A  +  A     T
Sbjct: 52  ISLIVPFPAGGTTDVLARALADKLSQS--LGQPVVVESRPGAGATLGADYVAKAKPDGYT 109

Query: 90  LMINSTPIVIR-SLSGVFPQSF-RDLTPVAEIVSDYGAFVV-AGDSKYTSWEQVVADFKA 146
           L++ +    I  S+    P  F +DL P+  +       VV A ++   +  ++VA  KA
Sbjct: 110 LLMGAVHHTIATSVYKKLPYDFQKDLAPITVVAMVPNVLVVNAANTPAKNVAELVALAKA 169

Query: 147 NPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVLST 206
            P+++   G +  G+  HL+        G     + +V Y   G   T LL G+  +   
Sbjct: 170 APEKLAY-GSNGNGTAQHLIGTQFQASTGTT---LLHVPYKGSGPLTTDLLGGQVAMSFD 225

Query: 207 GLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYG-NPTTFVNWRGYFAAPGVSAEK 265
            +  VL+  KSG++R LA+T+ +R  + PD+PTL + G        W G  A      E 
Sbjct: 226 TITPVLQHIKSGKLRALAVTTARRSTVLPDVPTLEEAGLKGFDIGTWFGVLAPAATPKEI 285

Query: 266 VAEWNEVFKKMFASEEW 282
           VA  N    K+  S ++
Sbjct: 286 VARLNAEMVKIIHSPDF 302