Pairwise Alignments

Query, 323 a.a., tripartite tricarboxylate transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 5e-18
 Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 18/299 (6%)

Query: 30  IHFIVPGGAGGGWDMTARATGDALMKAKLVGNASYQNLSGGGGGKAIAHLIETADRQQDT 89
           I FIVP   G G D  +R TG+ + K  L      +N +G  G   + +    A      
Sbjct: 30  IRFIVPFPPGAGSDAISRQTGERMSKG-LGQPVVIENRAGAAGNIGMEYAARQAPDGYTI 88

Query: 90  LMINST-----PIVIRSLSGVFPQSFRDLTPVAEIVSDYGAFVVAGDSKYTSWEQVVADF 144
            +I+++     PI  R+L G  P+  +D  P+  I        V  +    + +++VA  
Sbjct: 89  ALISTSTAILNPITYRNL-GYKPE--KDFAPIGVIARQPYILAVNPNVPARTLQELVALA 145

Query: 145 KANPKQIKIAGGSARGSMDHLVAAAAFKGQGLDPKEVRYVAYDAGGSAMTALLSGETQVL 204
           KANP ++  A     G   HL      +   +D   + +V Y   G A T L+ G+T ++
Sbjct: 146 KANPGKLSFAS-PGNGHATHLGGELMKEMAAID---MIHVPYQGSGPATTDLIGGQTTMM 201

Query: 205 STGLGEVLEMSKSGQVRVLAITSPKRLDIAPDIPTLADYGNPT-TFVNWRGYFAAPGVSA 263
                +  ++ KSG++R +A  +P R    P++PT  + G P      W G     G+  
Sbjct: 202 FVLASDGTQIIKSGRLRAIATAAPTRAAQLPEVPTFQEAGFPDFDLTAWFGLVGVAGMPP 261

Query: 264 EKVAEWNEVFKKMFASEEW-KVIRDRNGWIDSYKGDKE-FYAFLEEQEKQMGDLMRELG 320
             V   N    K  A     K + D N   +   G  E F A + ++ ++   ++++ G
Sbjct: 262 ATVQRLNVELNKALADPTMRKWLMDGNQ--EPVGGSPEDFSALMAKERRRWAPVIKKAG 318